RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 VSIG1Q86XK7 387 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 RHPN2Q8IUC4 686 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 TMEM192Q8IY95 271 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 ARFGAP1Q8N6T3 406 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 HAO1Q9UJM8 370 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 CFAP73A6NFT4 308 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 GPX6P59796 221 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 LACTBP83111 547 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 LMNB2Q03252 620 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 OVGP1Q12889 678 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 ZNF268Q14587 947 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 PTPN20Q4JDL3 420 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 HSPH1Q92598 858 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 NLRP4Q96MN2 994 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 MAP3K6O95382 1288 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 TCF7P36402 384 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 MSH2P43246 934 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 ZNF132P52740 706 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 ZNF699Q32M78 642 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 BBS9Q3SYG4 887 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 RAB6CQ53S08 254 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 CATSPERGQ6ZRH7 1159 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 C3orf62Q6ZUJ4 267 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 CENPUQ71F23 418 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 NSMCE1Q8WV22 266 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 CAMKK2Q96RR4 588 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 RAB6CQ9H0N0 254 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 SYNCQ9H7C4 482 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 YY1AP1Q9H869 796 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 AS3MTQ9HBK9 375 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 PIM2Q9P1W9 311 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 CNTN6Q9UQ52 1028 aa14.26□□□□□ -0.13
HERPUD1-204ENST00000439977 EIF4E1BA6NMX2 242 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 STAM2O75886 525 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 ZBTB7AO95365 584 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 CALB1P05937 261 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 KRT3P12035 628 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 SPARCL1Q14515 664 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 HIF1AQ16665 826 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 LVRNQ6Q4G3 990 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 BRSK2Q8IWQ3 736 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 FAM71DQ8N9W8 422 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 KCNV2Q8TDN2 545 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 PYROXD1Q8WU10 500 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 LBHD1Q9BQE6 289 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 CALN1Q9BXU9 219 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 NIF3L1Q9GZT8 377 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 DCTN4Q9UJW0 460 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 TCRBV5S1A1TA0A578 114 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 INO80B-WBP1J3KQ70 363 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 MSCO60682 206 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 RXRBP28702 533 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 ELF1P32519 619 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 ZNF280AP59817 542 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 DUOXA2Q1HG44 320 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 SH3PXD2AQ5TCZ1 1133 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 HHATQ5VTY9 493 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 UNC45BQ8IWX7 931 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 LRRC8CQ8TDW0 803 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 INO80BQ9C086 356 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 HMGXB4Q9UGU5 601 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 CHKBQ9Y259 395 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 NFKBIEO00221 500 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 DIAPH2O60879 1101 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 LRCH4O75427 683 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 TOM1L1O75674 476 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 FARP2O94887 1054 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 CBX6O95503 412 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 ADRA1DP25100 572 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 PSMC1P62191 440 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 BASP1P80723 227 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 TREML2Q5T2D2 321 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 DCAF15Q66K64 600 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 ZC3H18Q86VM9 953 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 NCAPG2Q86XI2 1143 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 RELL1Q8IUW5 271 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 GBP7Q8N8V2 638 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 DENND1AQ8TEH3 1009 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 RSAD2Q8WXG1 361 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 CPXM1Q96SM3 734 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 ARHGEF3Q9NR81 526 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 METTL5Q9NRN9 209 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 ADAMTS5Q9UNA0 930 aa14.25□□□□□ -0.13
HERPUD1-204ENST00000439977 CLUHO75153 1309 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 KIAA1217Q5T5P2 1943 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 ALOX15BO15296 676 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 FAM189A1O60320 539 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 PIGRP01833 764 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 LAMTOR4Q0VGL1 99 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 MMRN1Q13201 1228 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 MORF4L2Q15014 288 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 HSDL1Q3SXM5 330 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 NPNTQ6UXI9 565 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 FBF1Q8TES7 1133 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 CPT1BQ92523 772 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 LRRC37BQ96QE4 947 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 WDR83Q9BRX9 315 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 NPHS2Q9NP85 383 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms