RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 C7orf26Q96N11 449 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 KCNJ15Q99712 375 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 PAIP2Q9BPZ3 127 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 PLA2G12BQ9BX93 195 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 KATNBL1Q9H079 304 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 KCTD10Q9H3F6 313 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 ACAD9Q9H845 621 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 TLR9Q9NR96 1032 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CCM2LQ9NUG4 571 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 HPF1Q9NWY4 346 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 HSPBP1Q9NZL4 362 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 TMOD4Q9NZQ9 345 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 SUN2Q9UH99 717 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 SERPINB13Q9UIV8 391 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 VPS28Q9UK41 221 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 TRAF6Q9Y4K3 522 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 PCDHA9Q9Y5H5 950 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 FLT1P17948 1338 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ATAD2BQ9ULI0 1458 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 CCDC66A2RUB6 948 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 CAPN8A6NHC0 703 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 H0Y626 953 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ACKR2O00590 384 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 DAPK3O43293 454 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 PTP4A3O75365 173 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ALDH2P05091 517 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 SCG5P05408 212 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 THP07101 528 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 KRT13P13646 458 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 HDCP19113 662 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 C5AR1P21730 350 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ATP5F1P24539 256 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 HOXD10P28358 340 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ATP5DP30049 168 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ABCD1P33897 745 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 MSX2P35548 267 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 KPNA1P52294 538 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ITGA8P53708 1063 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 IL1RL1Q01638 556 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 OCRLQ01968 901 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 FOXO1Q12778 655 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 FSTL1Q12841 308 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 MRPL28Q13084 256 aaKnown RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ADAM15Q13444 863 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 PMS2P11Q13670 270 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 MYBPC3Q14896 1274 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 POLD3Q15054 466 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 RASA2Q15283 850 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 PFKFB4Q16877 469 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 BROXQ5VW32 411 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 CREB3L3Q68CJ9 461 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 DENND5AQ6IQ26 1287 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 MAMDC4Q6UXC1 1216 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 BTNL9Q6UXG8 535 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 USP45Q70EL2 814 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 MAMDC2Q7Z304 686 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 NUP54Q7Z3B4 507 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 SGMS1Q86VZ5 419 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 TBC1D21Q8IYX1 336 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 CCAR2Q8N163 923 aaKnown RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 MIER2Q8N344 545 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 RNF152Q8N8N0 203 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 TRIML1Q8N9V2 468 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 TOR1AIP2Q8NFQ8 470 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 OR10H5Q8NGA6 315 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ADAMTS15Q8TE58 950 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 CREB3L4Q8TEY5 395 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 LMBR1Q8WVP7 490 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 BRI3BPQ8WY22 251 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ITFG2Q969R8 447 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 NSUN4Q96CB9 384 aaKnown RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ZNF845Q96IR2 970 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 TIGD1Q96MW7 591 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 AGAP2Q99490 1192 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 AGXT2Q9BYV1 514 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 BTBD1Q9H0C5 482 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 SIL1Q9H173 461 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 SLC39A2Q9NP94 309 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 HAUS2Q9NVX0 235 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 H2AFY2Q9P0M6 372 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 LRFN1Q9P244 771 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 CPSF2Q9P2I0 782 aaKnown RBP4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 B4GALT6Q9UBX8 382 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 LAMP5Q9UJQ1 280 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 ZKSCAN5Q9Y2L8 839 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 DMRT1Q9Y5R6 373 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 SLC30A1Q9Y6M5 507 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 PCSK5Q92824 1860 aa4.01□□□□□ -1.77
HMGB1P12-201ENST00000438594 SYNJ2BP-COX16A0A087WUM0 186 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 POM121BA6NF01 834 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 GOLGA8AA7E2F4 631 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 ZNF839A8K0R7 811 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 GOLGA8BA8MQT2 603 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 TGM5O43548 720 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 MGEA5O60502 916 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 SRGAP2O75044 1071 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 SLC22A3O75751 556 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 FSBPO95073 299 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 IL18BPO95998 194 aa4□□□□□ -1.77
HMGB1P12-201ENST00000438594 GNAT1P11488 350 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms