RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 LCLAT1Q6UWP7 414 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.43■■□□□ 1.5
CPSF4-204ENST00000436336 SLC39A11Q8N1S5 342 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 C17orf53Q8N3J3 647 aaPredicted RBP24.43■■□□□ 1.5
CPSF4-204ENST00000436336 SP7Q8TDD2 431 aaPredicted RBP24.43■■□□□ 1.5
CPSF4-204ENST00000436336 CYFIP2Q96F07 1278 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 ZNF518BQ9C0D4 1074 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 LHX5Q9H2C1 402 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 CEP83Q9Y592 693 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 USP27XA6NNY8 438 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 TMCO5BA8MYB1 307 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 TLL1O43897 1013 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 SSTR3P32745 418 aaPredicted RBP24.42■■□□□ 1.5
CPSF4-204ENST00000436336 NOMO3P69849 1222 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 PPP1R26Q5T8A7 1209 aaPredicted RBP24.42■■□□□ 1.5
CPSF4-204ENST00000436336 ACAD10Q6JQN1 1059 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 ZNF662Q6ZS27 426 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 PASD1Q8IV76 773 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 REXO1L1PQ8IX06 675 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 FAM49BQ9NUQ9 324 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 TAS2R14Q9NYV8 317 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 TSPAN16Q9UKR8 245 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 INTUQ9ULD6 942 aa24.42■■□□□ 1.5
CPSF4-204ENST00000436336 PTPRDP23468 1912 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 GOLGA6L9A6NEM1 432 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 MICAL2O94851 1124 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 CDH5P33151 784 aaPredicted RBP24.41■■□□□ 1.5
CPSF4-204ENST00000436336 PSMC1P62191 440 aaKnown RBP24.41■■□□□ 1.5
CPSF4-204ENST00000436336 CENPCQ03188 943 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 C9orf50Q5SZB4 431 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 KIAA0319Q5VV43 1072 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 TMEM35BQ8NCS4 154 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 PPP1R13BQ96KQ4 1090 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 PJA2O43164 708 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 ATP2C2O75185 946 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 H2AFZP0C0S5 128 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 INTS6LQ5JSJ4 861 aaKnown RBP24.41■■□□□ 1.5
CPSF4-204ENST00000436336 VARS2Q5ST30 1063 aaKnown RBP24.41■■□□□ 1.5
CPSF4-204ENST00000436336 H2AFVQ71UI9 128 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 CEP57Q86XR8 500 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 RNF168Q8IYW5 571 aaPredicted RBP24.41■■□□□ 1.5
CPSF4-204ENST00000436336 TMEM169Q96HH4 297 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 CRTAC1Q9NQ79 661 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 SPG21Q9NZD8 308 aa24.41■■□□□ 1.5
CPSF4-204ENST00000436336 FTLP02792 175 aaPredicted RBP24.4■■□□□ 1.5
CPSF4-204ENST00000436336 PPM1AP35813 382 aa24.4■■□□□ 1.5
CPSF4-204ENST00000436336 MRPL58Q14197 206 aaKnown RBP24.4■■□□□ 1.5
CPSF4-204ENST00000436336 NAA35Q5VZE5 725 aa24.4■■□□□ 1.5
CPSF4-204ENST00000436336 DENND1BQ6P3S1 775 aa24.4■■□□□ 1.5
CPSF4-204ENST00000436336 CLP1Q92989 425 aaKnown RBP24.4■■□□□ 1.5
CPSF4-204ENST00000436336 RNPC3Q96LT9 517 aaKnown RBP24.4■■□□□ 1.5
CPSF4-204ENST00000436336 LPIN3Q9BQK8 851 aa24.4■■□□□ 1.5
CPSF4-204ENST00000436336 HESX1Q9UBX0 185 aa24.4■■□□□ 1.5
CPSF4-204ENST00000436336 PCDHB12Q9Y5F1 795 aa24.4■■□□□ 1.5
CPSF4-204ENST00000436336 ANKRD62A6NC57 917 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 M0QYV0 167 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 NSFP46459 744 aaKnown RBP24.39■■□□□ 1.5
CPSF4-204ENST00000436336 TSPY1Q01534 308 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 KIF5AQ12840 1032 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 GOLGA7BQ2TAP0 167 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 OR10T2Q8NGX3 314 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 MYCBPAPQ8TBZ2 947 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 HNRNPABQ99729 332 aaKnown RBP24.39■■□□□ 1.5
CPSF4-204ENST00000436336 TTPALQ9BTX7 342 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 PACSIN1Q9BY11 444 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 TSGA10Q9BZW7 698 aa24.39■■□□□ 1.5
CPSF4-204ENST00000436336 PLXNA4Q9HCM2 1894 aa24.39■■□□□ 1.49
CPSF4-204ENST00000436336 A0A0U1RQJ8 604 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 RCCD1A6NED2 376 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 LINC00271P0C7V0 271 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 CCDC130P13994 396 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 GALCP54803 685 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 SHHQ15465 462 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 USP41Q3LFD5 358 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 ARHGAP29Q52LW3 1261 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 MDH1BQ5I0G3 518 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 ZNF280DQ6N043 979 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 FAM171BQ6P995 826 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 C1orf131Q8NDD1 294 aaKnown RBP24.38■■□□□ 1.49
CPSF4-204ENST00000436336 ATRIPQ8WXE1 791 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 CPA5Q8WXQ8 436 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 TFR2Q9UP52 801 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 MYBPHLA2RUH7 354 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 KRT86O43790 486 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 GPD2P43304 727 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 MAPRE1Q15691 268 aaKnown RBP24.38■■□□□ 1.49
CPSF4-204ENST00000436336 ANKS3Q6ZW76 656 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 DNAAF5Q86Y56 855 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 PHF13Q86YI8 300 aaPredicted RBP24.38■■□□□ 1.49
CPSF4-204ENST00000436336 WDTC1Q8N5D0 677 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 SLC2A14Q8TDB8 520 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 VN1R3Q9BXE9 311 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 OXCT2Q9BYC2 517 aaPredicted RBP24.38■■□□□ 1.49
CPSF4-204ENST00000436336 LACRTQ9GZZ8 138 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 LZTFL1Q9NQ48 299 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 GTF3C4Q9UKN8 822 aa24.38■■□□□ 1.49
CPSF4-204ENST00000436336 H7C4K7 107 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 SOD2P04179 222 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 TMEM253P0C7T8 217 aa24.37■■□□□ 1.49
CPSF4-204ENST00000436336 ADORA2BP29275 332 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms