RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 MAGED2Q9UNF1 606 aaPredicted RBP16.91■□□□□ 0.3
CALD1-208ENST00000435928 HELZP42694 1942 aaKnown RBP16.91■□□□□ 0.3
CALD1-208ENST00000435928 ATG2BQ96BY7 2078 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 EML5Q05BV3 1969 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 MYMKA6NI61 221 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 HUS1O60921 280 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
CALD1-208ENST00000435928 CSH1P0DML2 217 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 CSH2P0DML3 217 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 HMGA1P17096 107 aaKnown RBP16.9■□□□□ 0.3
CALD1-208ENST00000435928 PDCP20941 246 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 WNT7BP56706 349 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 CEP68Q76N32 757 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 TMEM150AQ86TG1 271 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 C1orf127Q8N9H9 656 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 STKLD1Q8NE28 680 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 NETO1Q8TDF5 533 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 LEO1Q8WVC0 666 aaPredicted RBP16.9■□□□□ 0.3
CALD1-208ENST00000435928 MRPS31Q92665 395 aaKnown RBP16.9■□□□□ 0.3
CALD1-208ENST00000435928 OLFML3Q9NRN5 406 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 GKN1Q9NS71 199 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 SEMA4GQ9NTN9 838 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 TMLHEQ9NVH6 421 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 DDX43Q9NXZ2 648 aaKnown RBP16.9■□□□□ 0.3
CALD1-208ENST00000435928 L1RE1Q9UN81 338 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 AGAP1Q9UPQ3 857 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 CCL26Q9Y258 94 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 SRPRBQ9Y5M8 271 aaKnown RBP16.9■□□□□ 0.3
CALD1-208ENST00000435928 MYO16Q9Y6X6 1858 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 ANAPC1Q9H1A4 1944 aa16.9■□□□□ 0.3
CALD1-208ENST00000435928 KIAA1549LQ6ZVL6 1849 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 DCDC2BA2VCK2 349 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 LDHAP00338 332 aaKnown RBP16.89■□□□□ 0.29
CALD1-208ENST00000435928 F11P03951 625 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 IDEP14735 1019 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 HOXA6P31267 233 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 GPR15P49685 360 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 CASP5P51878 434 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 MYL7Q01449 175 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 GRSF1Q12849 480 aaKnown RBP eCLIP16.89■□□□□ 0.29
CALD1-208ENST00000435928 ALCAMQ13740 583 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 RUNX3Q13761 415 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 CSRP2Q16527 193 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 TRIM68Q6AZZ1 485 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 CC2D1AQ6P1N0 951 aaPredicted RBP16.89■□□□□ 0.29
CALD1-208ENST00000435928 PRR23CQ6ZRP0 262 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 WDR5BQ86VZ2 330 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 SYCP3Q8IZU3 236 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 TMEM86AQ8N2M4 240 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 LRRC52Q8N7C0 313 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 ZSWIM2Q8NEG5 633 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 NOC3LQ8WTT2 800 aaKnown RBP16.89■□□□□ 0.29
CALD1-208ENST00000435928 CACTINQ8WUQ7 758 aaKnown RBP16.89■□□□□ 0.29
CALD1-208ENST00000435928 USP13Q92995 863 aaPredicted RBP16.89■□□□□ 0.29
CALD1-208ENST00000435928 DNAJC19Q96DA6 116 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 CLIC6Q96NY7 704 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 FAM83CQ9BQN1 747 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 EBF3Q9H4W6 596 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 ABCB6Q9NP58 842 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 HPS4Q9NQG7 708 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 TDP1Q9NUW8 608 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 UXTQ9UBK9 157 aaPredicted RBP16.89■□□□□ 0.29
CALD1-208ENST00000435928 ITGA11Q9UKX5 1188 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 PCDHB13Q9Y5F0 798 aa16.89■□□□□ 0.29
CALD1-208ENST00000435928 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.88■□□□□ 0.29
CALD1-208ENST00000435928 GARTP22102 1010 aa16.88■□□□□ 0.29
CALD1-208ENST00000435928 ACAT1P24752 427 aaKnown RBP16.88■□□□□ 0.29
CALD1-208ENST00000435928 STAT6P42226 847 aa16.88■□□□□ 0.29
CALD1-208ENST00000435928 RPL10AP62906 217 aaKnown RBP16.88■□□□□ 0.29
CALD1-208ENST00000435928 CEBPZQ03701 1054 aaKnown RBP16.88■□□□□ 0.29
CALD1-208ENST00000435928 INTS6LQ5JSJ4 861 aaKnown RBP16.88■□□□□ 0.29
CALD1-208ENST00000435928 SDHAF4Q5VUM1 108 aa16.88■□□□□ 0.29
CALD1-208ENST00000435928 TXNDC8Q6A555 127 aa16.88■□□□□ 0.29
CALD1-208ENST00000435928 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
CALD1-208ENST00000435928 FAM160A2Q8N612 972 aaPredicted RBP16.88■□□□□ 0.29
CALD1-208ENST00000435928 ACBD6Q9BR61 282 aa16.88■□□□□ 0.29
CALD1-208ENST00000435928 LAMA1P25391 3075 aa16.88■□□□□ 0.29
CALD1-208ENST00000435928 PTPRDP23468 1912 aa16.88■□□□□ 0.29
CALD1-208ENST00000435928 GOLGA8IPA6NC78 632 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 GOLGA8JA6NMD2 632 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 SOBPA7XYQ1 873 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 SLC30A4O14863 429 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 EXTL3O43909 919 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 FOXD2O60548 495 aaPredicted RBP16.87■□□□□ 0.29
CALD1-208ENST00000435928 ATG13O75143 517 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 CENPBP07199 599 aaPredicted RBP16.87■□□□□ 0.29
CALD1-208ENST00000435928 KRT19P08727 400 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 TMEM191BP0C7N4 346 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 CYP2F1P24903 491 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 AMPD2Q01433 879 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 CUL4AQ13619 759 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 ZNF268Q14587 947 aaPredicted RBP16.87■□□□□ 0.29
CALD1-208ENST00000435928 TMEM196Q5HYL7 178 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 FSTL4Q6MZW2 842 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 PKN3Q6P5Z2 889 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 MON1AQ86VX9 555 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 CSGALNACT2Q8N6G5 542 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 TRMT2BQ96GJ1 504 aaKnown RBP16.87■□□□□ 0.29
CALD1-208ENST00000435928 FAM84AQ96KN4 292 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 CBWD1Q9BRT8 395 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms