RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 MED21Q13503 144 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 DALRD3Q5D0E6 543 aaKnown RBP11.42□□□□□ -0.58
CCDC171-202ENST00000432954 FRA10AC1Q70Z53 315 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 MAMDC2Q7Z304 686 aaPredicted RBP11.42□□□□□ -0.58
CCDC171-202ENST00000432954 CREG2Q8IUH2 290 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 CNGA4Q8IV77 575 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 MINDY2Q8NBR6 621 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 ZNF680Q8NEM1 530 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 CAPSLQ8WWF8 208 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 HPS1Q92902 700 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 C1QTNF7Q9BXJ2 289 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 MKRN2Q9H000 416 aaKnown RBP11.42□□□□□ -0.58
CCDC171-202ENST00000432954 INTS2Q9H0H0 1204 aaKnown RBP11.42□□□□□ -0.58
CCDC171-202ENST00000432954 PABPC3Q9H361 631 aaKnown RBP11.42□□□□□ -0.58
CCDC171-202ENST00000432954 POLE3Q9NRF9 147 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 VWA7Q9Y334 891 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 ZMYM6O95789 1325 aa11.42□□□□□ -0.58
CCDC171-202ENST00000432954 NUP153P49790 1475 aaKnown RBP11.42□□□□□ -0.58
CCDC171-202ENST00000432954 A0A1B0GWJ7 208 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 ENC1O14682 589 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 MAPK13O15264 365 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 ZBTB14O43829 449 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 EXOC3O60645 756 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CLN5O75503 358 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 MICAL2O94851 1124 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 HAUS5O94927 633 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CD4P01730 458 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 SLC3A2P08195 630 aaKnown RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 C6orf222P0C671 652 aaPredicted RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 GFAPP14136 432 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CHN1P15882 459 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CDH2P19022 906 aaPredicted RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 STT3AP46977 705 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 SLC26A2P50443 739 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 PTPN5P54829 565 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 XIAPP98170 497 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 FOLH1Q04609 750 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 COASYQ13057 564 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 SELENBP1Q13228 472 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 BEND3Q5T5X7 828 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 AGAP7PQ5VUJ5 663 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 DUPD1Q68J44 220 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 RHOUQ7L0Q8 258 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 KSR1Q8IVT5 923 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CCDC36Q8IYA8 594 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 TCAIMQ8N3R3 496 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 OTUD7AQ8TE49 926 aaPredicted RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 C7orf26Q96N11 449 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 SERPINB12Q96P63 405 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 GON7Q9BXV9 100 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 TMEM60Q9H2L4 133 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 SP110Q9HB58 689 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 AMACRQ9UHK6 382 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 GTF2IRD1Q9UHL9 959 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 TEKT2Q9UIF3 430 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 DNAJC12Q9UKB3 198 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 NFU1Q9UMS0 254 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 SPG7Q9UQ90 795 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 STMND1H3BQB6 276 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 PSMD11O00231 422 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 KPNA4O00629 521 aaPredicted RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 FYB1O15117 783 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 AXIN1O15169 862 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 PIGNO95427 931 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 BAG2O95816 211 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CYP3A4P08684 503 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 HOXA6P31267 233 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 HSD17B3P37058 310 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CDK9P50750 372 aaKnown RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 EIF4A1P60842 406 aaKnown RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 ASPHQ12797 758 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 POU6F1Q14863 301 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 NR1I3Q14994 352 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 TBRG1Q3YBR2 411 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 POMZP3Q6PJE2 187 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 APOA5Q6Q788 366 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CRTC1Q6UUV9 634 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 ABRAXAS1Q6UWZ7 409 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 IZUMO2Q6UXV1 221 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 EPM2AIP1Q7L775 607 aaPredicted RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 SLFN11Q7Z7L1 901 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CCDC33Q8N5R6 958 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 OR8H1Q8NGG4 311 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 RFWD2Q8NHY2 731 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 FERMT1Q9BQL6 677 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 TDRD1Q9BXT4 1180 aaKnown RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 OR51B5Q9H339 312 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 ATP13A1Q9HD20 1204 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 DIMT1Q9UNQ2 313 aaKnown RBP11.41□□□□□ -0.58
CCDC171-202ENST00000432954 CEPT1Q9Y6K0 416 aa11.41□□□□□ -0.58
CCDC171-202ENST00000432954 DIP2AQ14689 1571 aa11.4□□□□□ -0.58
CCDC171-202ENST00000432954 TRPC5OSA6NMA1 111 aa11.4□□□□□ -0.58
CCDC171-202ENST00000432954 STX16-NPEPL1H3BU86 382 aa11.4□□□□□ -0.58
CCDC171-202ENST00000432954 DLATP10515 647 aaKnown RBP11.4□□□□□ -0.58
CCDC171-202ENST00000432954 CARSP49589 748 aaKnown RBP11.4□□□□□ -0.58
CCDC171-202ENST00000432954 PHC1P78364 1004 aa11.4□□□□□ -0.58
CCDC171-202ENST00000432954 TMEM95Q3KNT9 176 aa11.4□□□□□ -0.58
CCDC171-202ENST00000432954 FAM47EQ6ZV65 393 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms