RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 GRIN1Q05586 938 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 ZNF268Q14587 947 aaPredicted RBP16.03■□□□□ 0.16
PRKDC-203ENST00000432581 PDGFRLQ15198 375 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 SF3A1Q15459 793 aaKnown RBP16.03■□□□□ 0.16
PRKDC-203ENST00000432581 FSTL4Q6MZW2 842 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 CC2D1AQ6P1N0 951 aaPredicted RBP16.03■□□□□ 0.16
PRKDC-203ENST00000432581 MON1AQ86VX9 555 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 LEO1Q8WVC0 666 aaPredicted RBP16.03■□□□□ 0.16
PRKDC-203ENST00000432581 EBF3Q9H4W6 596 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 ABCB6Q9NP58 842 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 UXTQ9UBK9 157 aaPredicted RBP16.03■□□□□ 0.16
PRKDC-203ENST00000432581 STK17AQ9UEE5 414 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 CCL26Q9Y258 94 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 NUP210Q8TEM1 1887 aaPredicted RBP16.03■□□□□ 0.16
PRKDC-203ENST00000432581 PRPF40AO75400 957 aaKnown RBP16.02■□□□□ 0.16
PRKDC-203ENST00000432581 AKAP3O75969 853 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 DRD1P21728 446 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 LIMK1P53667 647 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 RPL10AP62906 217 aaKnown RBP16.02■□□□□ 0.16
PRKDC-203ENST00000432581 AASDHQ4L235 1098 aaPredicted RBP16.02■□□□□ 0.16
PRKDC-203ENST00000432581 TXNDC8Q6A555 127 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 IL31Q6EBC2 164 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 SFR1Q86XK3 245 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 TMEM86AQ8N2M4 240 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 CAMKK1Q8N5S9 505 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 CACTINQ8WUQ7 758 aaKnown RBP16.02■□□□□ 0.16
PRKDC-203ENST00000432581 ACCSQ96QU6 501 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 ACBD6Q9BR61 282 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 PI4K2AQ9BTU6 479 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 TMLHEQ9NVH6 421 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 CCDC39Q9UFE4 941 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 MAGED2Q9UNF1 606 aaPredicted RBP16.02■□□□□ 0.16
PRKDC-203ENST00000432581 TSC2P49815 1807 aa16.02■□□□□ 0.16
PRKDC-203ENST00000432581 CHD8Q9HCK8 2581 aa16.02■□□□□ 0.15
PRKDC-203ENST00000432581 AXIN1O15169 862 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 HUS1O60921 280 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 PPP1R37O75864 691 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 EPN2O95208 641 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 LDHAP00338 332 aaKnown RBP16.01■□□□□ 0.15
PRKDC-203ENST00000432581 ZNF806P0C7X5 589 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 CCDC192P0DO97 292 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 GAP43P17677 238 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 POLR2BP30876 1174 aaKnown RBP16.01■□□□□ 0.15
PRKDC-203ENST00000432581 RAP1GAPP47736 663 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 TFAMQ00059 246 aaKnown RBP16.01■□□□□ 0.15
PRKDC-203ENST00000432581 MYL7Q01449 175 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 FBXO43Q4G163 708 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 L1TD1Q5T7N2 865 aaKnown RBP16.01■□□□□ 0.15
PRKDC-203ENST00000432581 TRIM68Q6AZZ1 485 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 PKN3Q6P5Z2 889 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 DYMQ7RTS9 669 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 BRSK2Q8IWQ3 736 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 PDCL2Q8N4E4 241 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 LRRC52Q8N7C0 313 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 C12orf50Q8NA57 414 aaPredicted RBP16.01■□□□□ 0.15
PRKDC-203ENST00000432581 SPATA18Q8TC71 538 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 TRMT2BQ96GJ1 504 aaKnown RBP16.01■□□□□ 0.15
PRKDC-203ENST00000432581 FAM213AQ9BRX8 229 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 STRA6Q9BX79 667 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 ARRDC1-AS1Q9H2J1 176 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 MRPL44Q9H9J2 332 aaKnown RBP16.01■□□□□ 0.15
PRKDC-203ENST00000432581 PCDHGA5Q9Y5G8 931 aa16.01■□□□□ 0.15
PRKDC-203ENST00000432581 KMT2BQ9UMN6 2715 aaPredicted RBP16■□□□□ 0.15
PRKDC-203ENST00000432581 OTOL1A6NHN0 477 aaPredicted RBP16■□□□□ 0.15
PRKDC-203ENST00000432581 RNF40O75150 1001 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 NOL4O94818 638 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 CD2BP2O95400 341 aaKnown RBP16■□□□□ 0.15
PRKDC-203ENST00000432581 EGFP01133 1207 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 ARSAP15289 507 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 HOXC13P31276 330 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 PXNP49023 591 aaPredicted RBP16■□□□□ 0.15
PRKDC-203ENST00000432581 GPR15P49685 360 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 INTS6LQ5JSJ4 861 aaKnown RBP16■□□□□ 0.15
PRKDC-203ENST00000432581 CPA6Q8N4T0 437 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 C1orf127Q8N9H9 656 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 CHFRQ96EP1 664 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 EPSTI1Q96J88 318 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 MYRFLQ96LU7 910 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 P2RY13Q9BPV8 354 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 TMEM206Q9H813 350 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 DDX43Q9NXZ2 648 aaKnown RBP16■□□□□ 0.15
PRKDC-203ENST00000432581 ITGA11Q9UKX5 1188 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 L1RE1Q9UN81 338 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 AGAP1Q9UPQ3 857 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 PCDHB13Q9Y5F0 798 aa16■□□□□ 0.15
PRKDC-203ENST00000432581 SCN1AP35498 2009 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 CNOT1A5YKK6 2376 aaKnown RBP15.99■□□□□ 0.15
PRKDC-203ENST00000432581 ITGB3P05106 788 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 GARTP22102 1010 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 TXLNAP40222 546 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 LHX1P48742 406 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 FAM160A1Q05DH4 1040 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 ALCAMQ13740 583 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 MTF1Q14872 753 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 SF3A2Q15428 464 aaKnown RBP15.99■□□□□ 0.15
PRKDC-203ENST00000432581 DDR2Q16832 855 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 CFAP221Q4G0U5 840 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 RRAGBQ5VZM2 374 aa15.99■□□□□ 0.15
PRKDC-203ENST00000432581 SV2BQ7L1I2 683 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms