RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 TOP6BLQ8N6T0 577 aa13.44□□□□□ -0.26
SMPD4-204ENST00000430682 CGRRF1Q99675 332 aa13.44□□□□□ -0.26
SMPD4-204ENST00000430682 PRRX2Q99811 253 aa13.44□□□□□ -0.26
SMPD4-204ENST00000430682 ACBD6Q9BR61 282 aa13.44□□□□□ -0.26
SMPD4-204ENST00000430682 MRPL45Q9BRJ2 306 aaKnown RBP13.44□□□□□ -0.26
SMPD4-204ENST00000430682 TRPV4Q9HBA0 871 aa13.44□□□□□ -0.26
SMPD4-204ENST00000430682 KIAA1586Q9HCI6 787 aa13.44□□□□□ -0.26
SMPD4-204ENST00000430682 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
SMPD4-204ENST00000430682 HEBP1Q9NRV9 189 aa13.44□□□□□ -0.26
SMPD4-204ENST00000430682 EP300Q09472 2414 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-204ENST00000430682 GVINP1Q7Z2Y8 2422 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 A0A1W2PQ27 194 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 A0A1W2PQ64 194 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 A0A1W2PQD8 194 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 ARNTLO00327 626 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 TNNC2P02585 160 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 RPN1P04843 607 aaKnown RBP13.43□□□□□ -0.26
SMPD4-204ENST00000430682 TNNI1P19237 187 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 TUFMP49411 452 aaKnown RBP13.43□□□□□ -0.26
SMPD4-204ENST00000430682 NUBP1P53384 320 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 PSMC1P62191 440 aaKnown RBP13.43□□□□□ -0.26
SMPD4-204ENST00000430682 SNRPFP62306 86 aaKnown RBP13.43□□□□□ -0.26
SMPD4-204ENST00000430682 FZD5Q13467 585 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 DDR2Q16832 855 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 C1orf220Q5T0J3 134 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 FAM171BQ6P995 826 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 HS2ST1Q7LGA3 356 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 DCP1BQ8IZD4 617 aaKnown RBP13.43□□□□□ -0.26
SMPD4-204ENST00000430682 ZNF687Q8N1G0 1237 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 TMEM86AQ8N2M4 240 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 LEMD2Q8NC56 503 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 PJA1Q8NG27 643 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 SPPL2BQ8TCT7 592 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 PARD3BQ8TEW8 1205 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 ATOH1Q92858 354 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-204ENST00000430682 XYLT2Q9H1B5 865 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 ATXN3LQ9H3M9 355 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 CRTAC1Q9NQ79 661 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 EXOC1Q9NV70 894 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 ASB3Q9Y575 518 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 PCDHB5Q9Y5E4 795 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 MYOFQ9NZM1 2061 aa13.43□□□□□ -0.26
SMPD4-204ENST00000430682 LRRIQ3A6PVS8 624 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-204ENST00000430682 HEPACAM2A8MVW5 462 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 EXOC3O60645 756 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
SMPD4-204ENST00000430682 ZNF202O95125 648 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 VNN1O95497 513 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 PRAMEF12O95522 483 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 F11P03951 625 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 PDGFRBP09619 1106 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 TARSP26639 723 aaKnown RBP13.42□□□□□ -0.26
SMPD4-204ENST00000430682 GDI1P31150 447 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 MYL6P60660 151 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 TSPY1Q01534 308 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 PSMD2Q13200 908 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 GPR158Q5T848 1215 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 TDRD10Q5VZ19 366 aaKnown RBP13.42□□□□□ -0.26
SMPD4-204ENST00000430682 ARID3BQ8IVW6 561 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-204ENST00000430682 FAM200AQ8TCP9 573 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 C2orf15Q8WU43 125 aaKnown RBP13.42□□□□□ -0.26
SMPD4-204ENST00000430682 SLC46A2Q9BY10 475 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 SCAND2PQ9GZW5 306 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-204ENST00000430682 SMG9Q9H0W8 520 aaKnown RBP13.42□□□□□ -0.26
SMPD4-204ENST00000430682 SLITRK6Q9H5Y7 841 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 MAPK8IP1Q9UQF2 711 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 SIT1Q9Y3P8 196 aa13.42□□□□□ -0.26
SMPD4-204ENST00000430682 GPR179Q6PRD1 2367 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 KANSL1LA0AUZ9 987 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 PDXKO00764 312 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 TADA3O75528 432 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 RHOBTB3O94955 611 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 C4BPAP04003 597 aaKnown RBP13.41□□□□□ -0.26
SMPD4-204ENST00000430682 PSMC3P17980 439 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 WARSP23381 471 aaKnown RBP13.41□□□□□ -0.26
SMPD4-204ENST00000430682 LHX1P48742 406 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 NLRP12P59046 1061 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 CLDN10P78369 228 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 MYL7Q01449 175 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 PRKCQQ04759 706 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 ANGPT1Q15389 498 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 WDR44Q5JSH3 913 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 TPRG1Q6ZUI0 275 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 DPH6Q7L8W6 267 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 ITIH5Q86UX2 942 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 SLC9A9Q8IVB4 645 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 MFSD6LQ8IWD5 586 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 MAML2Q8IZL2 1156 aaPredicted RBP13.41□□□□□ -0.26
SMPD4-204ENST00000430682 RIN3Q8TB24 985 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 MYLPFQ96A32 169 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 ZFYVE19Q96K21 471 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 FNBP1Q96RU3 617 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 SYT15Q9BQS2 421 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 TRMT61BQ9BVS5 477 aaKnown RBP13.41□□□□□ -0.26
SMPD4-204ENST00000430682 DPEP3Q9H4B8 488 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 BRD9Q9H8M2 597 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 LTB4R2Q9NPC1 389 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 TMEM30AQ9NV96 361 aa13.41□□□□□ -0.26
SMPD4-204ENST00000430682 CGNQ9P2M7 1197 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms