RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 C1orf228Q6PIY5 440 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 LRRTM3Q86VH5 581 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 C1orf210Q8IVY1 113 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 OR5B17Q8NGF7 314 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 CSGALNACT1Q8TDX6 532 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 CCDC47Q96A33 483 aaKnown RBP10.92□□□□□ -0.66
COMMD1-202ENST00000427417 MSANTD3Q96H12 275 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 CCDC34Q96HJ3 373 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 FUBP3Q96I24 572 aaKnown RBP eCLIP10.92□□□□□ -0.66
COMMD1-202ENST00000427417 CGRRF1Q99675 332 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 LPIN3Q9BQK8 851 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 TASP1Q9H6P5 420 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 ZNF334Q9HCZ1 680 aaPredicted RBP10.92□□□□□ -0.66
COMMD1-202ENST00000427417 LTB4R2Q9NPC1 389 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 HEBP1Q9NRV9 189 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 OBP2AQ9NY56 170 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 DLGAP2Q9P1A6 1054 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 MTF2Q9Y483 593 aaPredicted RBP10.92□□□□□ -0.66
COMMD1-202ENST00000427417 CACNA1IQ9P0X4 2223 aa10.92□□□□□ -0.66
COMMD1-202ENST00000427417 A0A1B0GVL5 298 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 PRR23AA6NEV1 266 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 GABRDO14764 452 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 CHADO15335 359 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 EXOC3O60645 756 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 KIF20AO95235 890 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 FAM163BP0C2L3 166 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 ACAT1P24752 427 aaKnown RBP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 DDX6P26196 483 aaKnown RBP eCLIP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 WEE1P30291 646 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 VIPR2P41587 438 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 SYKP43405 635 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 AP3M2P53677 418 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 MLLT6P55198 1093 aaPredicted RBP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 TRPC3Q13507 836 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 BECN1Q14457 450 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 SOWAHAQ2M3V2 549 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 CFAP221Q4G0U5 840 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 ZC3H14Q6PJT7 736 aaKnown RBP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 C4orf50Q6ZRC1 276 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 GAREM2Q75VX8 874 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 TRAPPC11Q7Z392 1133 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 SPATA2LQ8IUW3 424 aaPredicted RBP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 GPIHBP1Q8IV16 184 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 ARID3BQ8IVW6 561 aaPredicted RBP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 GRAMD1CQ8IYS0 662 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 GIPC2Q8TF65 315 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 NKD2Q969F2 451 aaPredicted RBP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 CCDC127Q96BQ5 260 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 MMS19Q96T76 1030 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 PI4K2AQ9BTU6 479 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 SEMA4AQ9H3S1 761 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 UXTQ9UBK9 157 aaPredicted RBP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 CDH9Q9ULB4 789 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 HPSEQ9Y251 543 aa10.91□□□□□ -0.66
COMMD1-202ENST00000427417 ZFHX2Q9C0A1 2572 aaPredicted RBP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 PTPRZ1P23471 2315 aaPredicted RBP10.91□□□□□ -0.66
COMMD1-202ENST00000427417 PTPRJQ12913 1337 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 SOBPA7XYQ1 873 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 KLRC4O43908 158 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 ATICP31939 592 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 RPS9P46781 194 aaKnown RBP10.9□□□□□ -0.66
COMMD1-202ENST00000427417 TNNC1P63316 161 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 PLCB2Q00722 1185 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 FCHO2Q0JRZ9 810 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 KMT5BQ4FZB7 885 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 ARHGAP29Q52LW3 1261 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 STXBP5Q5T5C0 1151 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 LIMS2Q7Z4I7 341 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 SLC9A9Q8IVB4 645 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 TMEM174Q8WUU8 243 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 FAM3CQ92520 227 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 MRPS31Q92665 395 aaKnown RBP10.9□□□□□ -0.66
COMMD1-202ENST00000427417 SYAP1Q96A49 352 aaPredicted RBP10.9□□□□□ -0.66
COMMD1-202ENST00000427417 CLDN23Q96B33 292 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 CEP295NLQ96MC4 621 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 SYT15Q9BQS2 421 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 IL21Q9HBE4 155 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 TMLHEQ9NVH6 421 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 SPATA6Q9NWH7 488 aaPredicted RBP10.9□□□□□ -0.66
COMMD1-202ENST00000427417 THG1LQ9NWX6 298 aaKnown RBP10.9□□□□□ -0.66
COMMD1-202ENST00000427417 GTF3C4Q9UKN8 822 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 ZDHHC9Q9Y397 364 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 PIAS3Q9Y6X2 628 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 R4GN57 208 aa10.9□□□□□ -0.66
COMMD1-202ENST00000427417 TICRRQ7Z2Z1 1910 aa10.9□□□□□ -0.67
COMMD1-202ENST00000427417 FAM186AA6NE01 2351 aa10.89□□□□□ -0.67
COMMD1-202ENST00000427417 RIF1Q5UIP0 2472 aaKnown RBP10.89□□□□□ -0.67
COMMD1-202ENST00000427417 FAM237AA0A1B0GTK4 181 aa10.89□□□□□ -0.67
COMMD1-202ENST00000427417 A0A1W2PQ27 194 aa10.89□□□□□ -0.67
COMMD1-202ENST00000427417 A0A1W2PQ64 194 aa10.89□□□□□ -0.67
COMMD1-202ENST00000427417 A0A1W2PQD8 194 aa10.89□□□□□ -0.67
COMMD1-202ENST00000427417 PDXKO00764 312 aa10.89□□□□□ -0.67
COMMD1-202ENST00000427417 LAMTOR5O43504 91 aa10.89□□□□□ -0.67
COMMD1-202ENST00000427417 CALUO43852 315 aaPredicted RBP10.89□□□□□ -0.67
COMMD1-202ENST00000427417 PHACTR2O75167 634 aa10.89□□□□□ -0.67
COMMD1-202ENST00000427417 STAU1O95793 577 aaKnown RBP10.89□□□□□ -0.67
COMMD1-202ENST00000427417 RPN1P04843 607 aaKnown RBP10.89□□□□□ -0.67
COMMD1-202ENST00000427417 WARSP23381 471 aaKnown RBP10.89□□□□□ -0.67
COMMD1-202ENST00000427417 CYP2F1P24903 491 aa10.89□□□□□ -0.67
COMMD1-202ENST00000427417 TARSP26639 723 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms