RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 CYP11A1P05108 521 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CNPP09543 421 aaKnown RBP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 FAM163BP0C2L3 166 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CCDC192P0DO97 292 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 TYMPP19971 482 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 ATICP31939 592 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 GTF2F1P35269 517 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 RNF144AP50876 292 aaPredicted RBP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 HYAL1Q12794 435 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CLN3Q13286 438 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 ADAM15Q13444 863 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 NCOA4Q13772 614 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 KCNC3Q14003 757 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 BMS1Q14692 1282 aaKnown RBP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 COL19A1Q14993 1142 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 DUSP6Q16828 381 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 TPD52L1Q16890 204 aaPredicted RBP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 ZSCAN23Q3MJ62 389 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 SV2CQ496J9 727 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CCDC40Q4G0X9 1142 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 ANO6Q4KMQ2 910 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CBWD6Q4V339 395 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CBWD3Q5JTY5 395 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CBWD5Q5RIA9 395 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 KRT39Q6A163 491 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 KIAA1841Q6NSI8 718 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 LILRA6Q6PI73 481 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 PRSS55Q6UWB4 352 aaPredicted RBP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 RSPO2Q6UXX9 243 aaPredicted RBP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 ANKS3Q6ZW76 656 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 DPH6Q7L8W6 267 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 USP37Q86T82 979 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 RBM23Q86U06 439 aaKnown RBP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 TAS1R2Q8TE23 839 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 SLC22A17Q8WUG5 538 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 RIN2Q8WYP3 895 aaPredicted RBP7.96□□□□□ -1.14
LINC01049-201ENST00000426840 SEMA4DQ92854 862 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 ELMO3Q96BJ8 720 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 UCN2Q96RP3 112 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 HSD3B7Q9H2F3 369 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 TLE6Q9H808 572 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 VRTNQ9H8Y1 702 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 TMEM8AQ9HCN3 771 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 ENTPD7Q9NQZ7 604 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 FANCLQ9NW38 375 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 FNIP2Q9P278 1114 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 SSX2IPQ9Y2D8 614 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 STXBP5LQ9Y2K9 1186 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 COQ4Q9Y3A0 265 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 NFE2L3Q9Y4A8 694 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 BACE2Q9Y5Z0 518 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 SZT2Q5T011 3432 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 CHD7Q9P2D1 2997 aa7.96□□□□□ -1.14
LINC01049-201ENST00000426840 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.95□□□□□ -1.14
LINC01049-201ENST00000426840 GABRDO14764 452 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 ADAM12O43184 909 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 STX10O60499 249 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 ASS1P00966 412 aaKnown RBP7.95□□□□□ -1.14
LINC01049-201ENST00000426840 URODP06132 367 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 RPL17P18621 184 aaKnown RBP7.95□□□□□ -1.14
LINC01049-201ENST00000426840 NRIP1P48552 1158 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 FMO5P49326 533 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 MYO1EQ12965 1108 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 BIRC3Q13489 604 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 TRPC3Q13507 836 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 IQCB1Q15051 598 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 CCDC85BQ15834 202 aaPredicted RBP7.95□□□□□ -1.14
LINC01049-201ENST00000426840 SOWAHAQ2M3V2 549 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 SGSM1Q2NKQ1 1148 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 EML3Q32P44 896 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 DCAF17Q5H9S7 520 aaPredicted RBP7.95□□□□□ -1.14
LINC01049-201ENST00000426840 CDKAL1Q5VV42 579 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 TCERG1LQ5VWI1 586 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 WSCD1Q658N2 575 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 PDXDC1Q6P996 788 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 APPL2Q8NEU8 664 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 VN1R2Q8NFZ6 395 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 LMO3Q8TAP4 145 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 CNOT6LQ96LI5 555 aaKnown RBP7.95□□□□□ -1.14
LINC01049-201ENST00000426840 ZNF560Q96MR9 790 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 BPIFA3Q9BQP9 254 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 RTP3Q9BQQ7 232 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 PI4K2AQ9BTU6 479 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 EMILIN2Q9BXX0 1053 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 MMRN2Q9H8L6 949 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.95□□□□□ -1.14
LINC01049-201ENST00000426840 RAB20Q9NX57 234 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 MTRRQ9UBK8 725 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 FBXL5Q9UKA1 691 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 L1RE1Q9UN81 338 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 R3HCC1Q9Y3T6 440 aaKnown RBP7.95□□□□□ -1.14
LINC01049-201ENST00000426840 SNX9Q9Y5X1 595 aa7.95□□□□□ -1.14
LINC01049-201ENST00000426840 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.94□□□□□ -1.14
LINC01049-201ENST00000426840 LRRC10BA6NIK2 292 aa7.94□□□□□ -1.14
LINC01049-201ENST00000426840 KCNJ18B7U540 433 aa7.94□□□□□ -1.14
LINC01049-201ENST00000426840 H7C4K7 107 aa7.94□□□□□ -1.14
LINC01049-201ENST00000426840 P4HA2O15460 535 aa7.94□□□□□ -1.14
LINC01049-201ENST00000426840 LINC01565O15544 149 aa7.94□□□□□ -1.14
LINC01049-201ENST00000426840 HUS1O60921 280 aa7.94□□□□□ -1.14
LINC01049-201ENST00000426840 GLP2RO95838 553 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms