RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 MYBL1P10243 752 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 UNGP13051 313 aaPredicted RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 ATP2A2P16615 1042 aaKnown RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 PPM1AP35813 382 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 NSFP46459 744 aaKnown RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 TSPY1Q01534 308 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 SMARCB1Q12824 385 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 CLEC16AQ2KHT3 1053 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 USP41Q3LFD5 358 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 FAM171A1Q5VUB5 890 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 ERICH1Q86X53 443 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 HERC6Q8IVU3 1022 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 REXO1L1PQ8IX06 675 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 DCP1BQ8IZD4 617 aaKnown RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 ANKRD52Q8NB46 1076 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 B3GALNT2Q8NCR0 500 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 LNX1Q8TBB1 728 aaPredicted RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 SLC20A1Q8WUM9 679 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 CTNNBL1Q8WYA6 563 aaPredicted RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 TMEM169Q96HH4 297 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 IGSF21Q96ID5 467 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 HNRNPABQ99729 332 aaKnown RBP10.96□□□□□ -0.65
MDC1-205ENST00000425072 DESI2Q9BSY9 194 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 ACP6Q9NPH0 428 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 CACNG4Q9UBN1 327 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 SSX2IPQ9Y2D8 614 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 RWDD3Q9Y3V2 267 aa10.96□□□□□ -0.65
MDC1-205ENST00000425072 VCANP13611 3396 aa10.96□□□□□ -0.66
MDC1-205ENST00000425072 OR6C75A6NL08 312 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 BTNL10A8MVZ5 291 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 TMCO5BA8MYB1 307 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 ZNF263O14978 683 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 TLL1O43897 1013 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 TMEM253P0C7T8 217 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 SETSIPP0DME0 302 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 FGFR3P22607 806 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
MDC1-205ENST00000425072 CDH5P33151 784 aaPredicted RBP10.95□□□□□ -0.66
MDC1-205ENST00000425072 NUBP1P53384 320 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 EPHB4P54760 987 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 GALCP54803 685 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 MRPL58Q14197 206 aaKnown RBP10.95□□□□□ -0.66
MDC1-205ENST00000425072 PTPN14Q15678 1187 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 NFE2Q16621 373 aaPredicted RBP10.95□□□□□ -0.66
MDC1-205ENST00000425072 LIN9Q5TKA1 542 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 KIAA1841Q6NSI8 718 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 FUT10Q6P4F1 479 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 ANKS3Q6ZW76 656 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 CEP57Q86XR8 500 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 PHF13Q86YI8 300 aaPredicted RBP10.95□□□□□ -0.66
MDC1-205ENST00000425072 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 GPR65Q8IYL9 337 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 ACRBPQ8NEB7 543 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 MYCBPAPQ8TBZ2 947 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 STK32AQ8WU08 396 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 TFAP2BQ92481 460 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 TWNKQ96RR1 684 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 PCDHB18PQ96TA0 734 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 SYT15Q9BQS2 421 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 TTPALQ9BTX7 342 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 UBXN6Q9BZV1 441 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 RC3H2Q9HBD1 1191 aaKnown RBP10.95□□□□□ -0.66
MDC1-205ENST00000425072 MRPL47Q9HD33 250 aaKnown RBP10.95□□□□□ -0.66
MDC1-205ENST00000425072 ADAM22Q9P0K1 906 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 MYO1AQ9UBC5 1043 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 STRIP2Q9ULQ0 834 aa10.95□□□□□ -0.66
MDC1-205ENST00000425072 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.95□□□□□ -0.66
MDC1-205ENST00000425072 TIMM13Q9Y5L4 95 aaPredicted RBP10.95□□□□□ -0.66
MDC1-205ENST00000425072 A0A0A6YYK5 440 aaPredicted RBP10.94□□□□□ -0.66
MDC1-205ENST00000425072 NT5C1B-RDH14C9J2C7 533 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 I3L4J1 428 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 O00370 1275 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 KIF5CO60282 957 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 B4GALT3O60512 393 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 MICAL2O94851 1124 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 ITGB1P05556 798 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 CALB1P05937 261 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 IGFBP6P24592 240 aaPredicted RBP10.94□□□□□ -0.66
MDC1-205ENST00000425072 ACADSBP45954 432 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 NAP1L1P55209 391 aaKnown RBP10.94□□□□□ -0.66
MDC1-205ENST00000425072 PLCB3Q01970 1234 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 CENPCQ03188 943 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
MDC1-205ENST00000425072 RASIP1Q5U651 963 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 FAM171BQ6P995 826 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 C4orf50Q6ZRC1 276 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 DDX53Q86TM3 631 aaKnown RBP10.94□□□□□ -0.66
MDC1-205ENST00000425072 OSTM1Q86WC4 334 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 RHOT2Q8IXI1 618 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 SLC39A11Q8N1S5 342 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 C12orf29Q8N999 325 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 COLGALT1Q8NBJ5 622 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 HASPINQ8TF76 798 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 CPA5Q8WXQ8 436 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 PPP1R13BQ96KQ4 1090 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 HSFY1Q96LI6 401 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 MED10Q9BTT4 135 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 DUSP16Q9BY84 665 aa10.94□□□□□ -0.66
MDC1-205ENST00000425072 GPR62Q9BZJ7 368 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 560.9 ms