RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PKMYT1Q99640 499 aa16.31■□□□□ 0.2
USB1-202ENST00000423271 GVINP1Q7Z2Y8 2422 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 A0A1B0GVL5 298 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 PVALEFA0A1B0GWK0 134 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 ARNTLO00327 626 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 ZNF263O14978 683 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 KLRC4O43908 158 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 PRAMEF12O95522 483 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 FGF19O95750 216 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 SLFN14P0C7P3 912 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 DLATP10515 647 aaKnown RBP16.3■□□□□ 0.2
USB1-202ENST00000423271 PFKFB1P16118 471 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 MYL7Q01449 175 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 CYP24A1Q07973 514 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 SURF1Q15526 300 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 DUOXA2Q1HG44 320 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 SOWAHAQ2M3V2 549 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 ZNF852Q6ZMS4 543 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 HS2ST1Q7LGA3 356 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 MAML2Q8IZL2 1156 aaPredicted RBP16.3■□□□□ 0.2
USB1-202ENST00000423271 KBTBD7Q8WVZ9 684 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 NKD2Q969F2 451 aaPredicted RBP16.3■□□□□ 0.2
USB1-202ENST00000423271 CCDC127Q96BQ5 260 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 PAGE5Q96GU1 130 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 ACBD6Q9BR61 282 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 BCO2Q9BYV7 579 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 OSBPL6Q9BZF3 934 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 GZF1Q9H116 711 aaPredicted RBP16.3■□□□□ 0.2
USB1-202ENST00000423271 KIAA1586Q9HCI6 787 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 GTF3C4Q9UKN8 822 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 R4GN57 208 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 OBSL1O75147 1896 aa16.3■□□□□ 0.2
USB1-202ENST00000423271 DENND4CQ5VZ89 1909 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 A0A1W2PQ27 194 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 A0A1W2PQ64 194 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 A0A1W2PQD8 194 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 GABRDO14764 452 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 PRPF40AO75400 957 aaKnown RBP16.29■□□□□ 0.2
USB1-202ENST00000423271 SP9P0CG40 484 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 HMGA1P17096 107 aaKnown RBP16.29■□□□□ 0.2
USB1-202ENST00000423271 CYP2F1P24903 491 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 CDC25CP30307 473 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 FCHO2Q0JRZ9 810 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 MYO1EQ12965 1108 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 FZD5Q13467 585 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 PSMD6Q15008 389 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 TAF12Q16514 161 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 NFE2Q16621 373 aaPredicted RBP16.29■□□□□ 0.2
USB1-202ENST00000423271 ARHGAP15Q53QZ3 475 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 LIMS2Q7Z4I7 341 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 TMEM150AQ86TG1 271 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 ZNF687Q8N1G0 1237 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 FSIP1Q8NA03 581 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 XXYLT1Q8NBI6 393 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 KIAA0895Q8NCT3 520 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 GCNAQ96QF7 691 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 CGRRF1Q99675 332 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 SMG9Q9H0W8 520 aaKnown RBP16.29■□□□□ 0.2
USB1-202ENST00000423271 GOLPH3LQ9H4A5 285 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 TRPV5Q9NQA5 729 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 SPATA6Q9NWH7 488 aaPredicted RBP16.29■□□□□ 0.2
USB1-202ENST00000423271 NDRG2Q9UN36 371 aaKnown RBP16.29■□□□□ 0.2
USB1-202ENST00000423271 HPSEQ9Y251 543 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 PIAS3Q9Y6X2 628 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 FANCMQ8IYD8 2048 aa16.29■□□□□ 0.2
USB1-202ENST00000423271 WDR87Q6ZQQ6 2873 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 EP300Q09472 2414 aaPredicted RBP16.28■□□□□ 0.2
USB1-202ENST00000423271 FAM237AA0A1B0GTK4 181 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 MYBPHLA2RUH7 354 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 ATP2C2O75185 946 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 TNNI1P19237 187 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 LHX1P48742 406 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 PSMC1P62191 440 aaKnown RBP16.28■□□□□ 0.2
USB1-202ENST00000423271 SNRPFP62306 86 aaKnown RBP16.28■□□□□ 0.2
USB1-202ENST00000423271 STK4Q13043 487 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 DDR2Q16832 855 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 KNOP1Q1ED39 458 aaKnown RBP16.28■□□□□ 0.2
USB1-202ENST00000423271 C12orf56Q8IXR9 622 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 YAF2Q8IY57 180 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 SPATA18Q8TC71 538 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 E2F7Q96AV8 911 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 CLDN23Q96B33 292 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 ZFYVE19Q96K21 471 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 FNBP1Q96RU3 617 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 TASP1Q9H6P5 420 aa16.28■□□□□ 0.2
USB1-202ENST00000423271 R3HCC1Q9Y3T6 440 aaKnown RBP16.28■□□□□ 0.2
USB1-202ENST00000423271 KIF26AQ9ULI4 1882 aaPredicted RBP16.27■□□□□ 0.2
USB1-202ENST00000423271 CHADO15335 359 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 CST3P01034 146 aaPredicted RBP16.27■□□□□ 0.2
USB1-202ENST00000423271 F11P03951 625 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 LMO2P25791 158 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 PCSK1P29120 753 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 SOX9P48436 509 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 CASP4P49662 377 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 NDUFA8P51970 172 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 NLRP12P59046 1061 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 KMT5BQ4FZB7 885 aa16.27■□□□□ 0.2
USB1-202ENST00000423271 PLEKHO2Q8TD55 490 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms