RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 PFKPQ01813 784 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 NCOA4Q13772 614 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 NFIL3Q16649 462 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 ARHGAP15Q53QZ3 475 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 FAM78AQ5JUQ0 283 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 C4orf50Q6ZRC1 276 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 INTS8Q75QN2 995 aaKnown RBP13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 OSTM1Q86WC4 334 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 FAM186BQ8IYM0 893 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 ENGASEQ8NFI3 743 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 OR6B3Q8NGW1 331 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 ZSCAN18Q8TBC5 510 aaPredicted RBP13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 GIPC2Q8TF65 315 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 KBTBD7Q8WVZ9 684 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 ZNF516Q92618 1163 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 SMARCD2Q92925 531 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 FAM122AQ96E09 287 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 TIGD1Q96MW7 591 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 LRRC3Q9BY71 257 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 ATXN3LQ9H3M9 355 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 ZNF334Q9HCZ1 680 aaPredicted RBP13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 CDH9Q9ULB4 789 aa13.62□□□□□ -0.23
HMGN1P4-201ENST00000419500 KRBA1A5PL33 1030 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 NRG2O14511 850 aaPredicted RBP13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 MAPK13O15264 365 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 TACC1O75410 805 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 MOSPD3O75425 235 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 PDGFRBP09619 1106 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 CSH1P0DML2 217 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 CSH2P0DML3 217 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 P4HA1P13674 534 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 FCARP24071 287 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 CDC25CP30307 473 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 PIK3CAP42336 1068 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 CLCN5P51795 746 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 VAMP7P51809 220 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 RPL10AP62906 217 aaKnown RBP13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 DLG4P78352 724 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 CLDN10P78369 228 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 CFAP221Q4G0U5 840 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 ZNF658Q5TYW1 1059 aaPredicted RBP13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 CWF19L1Q69YN2 538 aaKnown RBP13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 TANGO2Q6ICL3 276 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 LIMS2Q7Z4I7 341 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 MYLPFQ96A32 169 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 FUBP3Q96I24 572 aaKnown RBP eCLIP13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 SHDQ96IW2 340 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 ZSWIM3Q96MP5 696 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 PKMYT1Q99640 499 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 GTPBP4Q9BZE4 634 aaKnown RBP13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 ZNF318Q5VUA4 2279 aa13.61□□□□□ -0.23
HMGN1P4-201ENST00000419500 MYBPHLA2RUH7 354 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 A8MXQ7 604 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 IKBKBO14920 756 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 AKAP3O75969 853 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 AOC1P19801 751 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 CYP2F1P24903 491 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 LMO2P25791 158 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 PSMC2P35998 433 aaKnown RBP13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 GNL1P36915 607 aaPredicted RBP13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 CYP27A1Q02318 531 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 ADAM9Q13443 819 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 STIM1Q13586 685 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 GRM2Q14416 872 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 DDR2Q16832 855 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 CCDC142Q17RM4 750 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 EDRF1Q3B7T1 1238 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 ZNF667Q5HYK9 610 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 STXBP5Q5T5C0 1151 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 GPR158Q5T848 1215 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 IER5LQ5T953 404 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 SCARA5Q6ZMJ2 495 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 GAREM2Q75VX8 874 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 SCN4BQ8IWT1 228 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 TMEM105Q8N8V8 129 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 DEPDC1BQ8WUY9 529 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 ERCC4Q92889 916 aaPredicted RBP13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 TSG101Q99816 390 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 MRPL45Q9BRJ2 306 aaKnown RBP13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 IMPG2Q9BZV3 1241 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 XYLT2Q9H1B5 865 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 BRD9Q9H8M2 597 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 VRTNQ9H8Y1 702 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 TBC1D17Q9HA65 648 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 MAGEC2Q9UBF1 373 aaPredicted RBP13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 MAGED2Q9UNF1 606 aaPredicted RBP13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 ZDBF2Q9HCK1 2354 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 MUC6Q6W4X9 2439 aa13.6□□□□□ -0.23
HMGN1P4-201ENST00000419500 DPYSL4O14531 572 aa13.59□□□□□ -0.23
HMGN1P4-201ENST00000419500 CETN3O15182 167 aa13.59□□□□□ -0.23
HMGN1P4-201ENST00000419500 ATP2C2O75185 946 aa13.59□□□□□ -0.23
HMGN1P4-201ENST00000419500 C4BPAP04003 597 aaKnown RBP13.59□□□□□ -0.23
HMGN1P4-201ENST00000419500 TRIM49P0CI25 452 aa13.59□□□□□ -0.23
HMGN1P4-201ENST00000419500 TRIM49CP0CI26 452 aa13.59□□□□□ -0.23
HMGN1P4-201ENST00000419500 EPB41P11171 864 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms