RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 TCF4P15884 667 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 LMO2P25791 158 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 CDH5P33151 784 aaPredicted RBP11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 TNNT3P45378 269 aaPredicted RBP11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 TAF6P49848 677 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 RWDD2BP57060 319 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 CNGA2Q16280 664 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 GOLGA7BQ2TAP0 167 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 XKR4Q5GH76 650 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 ZFYVE27Q5T4F4 411 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 CCNI2Q6ZMN8 369 aaPredicted RBP11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 C18orf8Q96DM3 657 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 LHX5Q9H2C1 402 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 A0A1W2PQ45 241 aaPredicted RBP11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 A0A1W2PQY0 241 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 TMEM191CA6NGB0 347 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 F8VP50 259 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 CTNNA2P26232 953 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 RFC1P35251 1148 aaPredicted RBP11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 GPD2P43304 727 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 SCNN1GP51170 649 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 LILRA4P59901 499 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 ZNF252P-AS1Q0IIN9 211 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 PTK7Q13308 1070 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 ATP13A4Q4VNC1 1196 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 PPP1R2P3Q6NXS1 205 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 AGMOQ6ZNB7 445 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 CCDC50Q8IVM0 306 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 EMC1Q8N766 993 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 GSTCDQ8NEC7 633 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 JOSD2Q8TAC2 188 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 ZNF560Q96MR9 790 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 PPP1R10Q96QC0 940 aaKnown RBP11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 ADAM2Q99965 735 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 FUT8Q9BYC5 575 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 STARD7Q9NQZ5 370 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 BCCIPQ9P287 314 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 INPP5FQ9Y2H2 1132 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 TCRBV5S1A1TA0A578 114 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 ARL5CA6NH57 179 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 CASTOR2A6NHX0 329 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 TTI1O43156 1089 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 KRT3P12035 628 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 CCDC130P13994 396 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 ADORA2BP29275 332 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 GNL1P36915 607 aaPredicted RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 PDCLQ13371 301 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 CCDC142Q17RM4 750 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 ZDHHC14Q8IZN3 488 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 SLAIN1Q8ND83 568 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 APPL2Q8NEU8 664 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 HNRNPLLQ8WVV9 542 aaKnown RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 KBTBD7Q8WVZ9 684 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 ACSF2Q96CM8 615 aaPredicted RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 PAAF1Q9BRP4 392 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 SNX25Q9H3E2 840 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 CHST12Q9NRB3 414 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 METTL5Q9NRN9 209 aaKnown RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 IP6K2Q9UHH9 426 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 L1RE1Q9UN81 338 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 CCDC188H7C350 402 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 HUS1O60921 280 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 GRAP2O75791 330 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 CABYRO75952 493 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 POMCP01189 267 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 THP07101 528 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 TUBBP07437 444 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 CKBP12277 381 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 ACAT1P24752 427 aaKnown RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 MCM3P25205 808 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 SLC1A1P43005 524 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 CARSP49589 748 aaKnown RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 CBX1P83916 185 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 DMTNQ08495 405 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 TRIM71Q2Q1W2 868 aaKnown RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 SV2CQ496J9 727 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 PAN2Q504Q3 1202 aaKnown RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 GLE1Q53GS7 698 aaKnown RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 LCLAT1Q6UWP7 414 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 RPAINQ86UA6 219 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 TTC30AQ86WT1 665 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 DDX42Q86XP3 938 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 XYLT1Q86Y38 959 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 HACE1Q8IYU2 909 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 ADGRF2Q8IZF7 708 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 C3orf20Q8ND61 904 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 NAP1L3Q99457 506 aaPredicted RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 HEMGNQ9BXL5 484 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 TRIM31Q9BZY9 425 aa11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 TTC7AQ9ULT0 858 aaPredicted RBP11.28□□□□□ -0.6
SMPD4P1-201ENST00000416717 GOLGA6L10A0A0M3HER8 536 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 MOXD2PA6NHM9 499 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 E5RJQ4 531 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 PI4K2BG5E9Z4 385 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 ATP2C2O75185 946 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 GNRH1P01148 92 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 PFKMP08237 780 aa11.27□□□□□ -0.61
SMPD4P1-201ENST00000416717 CLCNKBP51801 687 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms