RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 RPL10AP62906 217 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 HPCAP84074 193 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 C16orf89Q6UX73 402 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 SETD3Q86TU7 594 aaPredicted RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 SYTL5Q8TDW5 730 aaPredicted RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 C1orf54Q8WWF1 131 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 YIPF2Q9BWQ6 316 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 SLC13A1Q9BZW2 595 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 SYNDIG1Q9H7V2 258 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 SLC25A13Q9UJS0 675 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 XRN1Q8IZH2 1706 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 GAKO14976 1311 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 SLIT2O94813 1529 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 ALDH1A2O94788 518 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 NPTXRO95502 500 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 FAM107AO95990 144 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 HLA-DRAP01903 254 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 MYL2P10916 166 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 ETFBP38117 255 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 DPYDQ12882 1025 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 PREPLQ4J6C6 727 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 CYP4A22Q5TCH4 519 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 ADCK2Q7Z695 626 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 CDR2LQ86X02 465 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 PCYOX1LQ8NBM8 494 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 SMYD3Q9H7B4 428 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 ZNF556Q9HAH1 456 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 MPP6Q9NZW5 540 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 FDPSP14324 419 aaKnown RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 GEMP55040 296 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 POLD3Q15054 466 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 NAB2Q15742 525 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 PHKG1Q16816 387 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 TIGD7Q6NT04 549 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 SEPT8Q92599 483 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 TMEM169Q96HH4 297 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 DACH2Q96NX9 599 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 OLFM3Q96PB7 478 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 DDX47Q9H0S4 455 aaKnown RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 ZC3H7BQ9UGR2 993 aaKnown RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 SLC37A4O43826 429 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 PQBP1O60828 265 aaKnown RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 F9P00740 461 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 TMEM253P0C7T8 217 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 ZNF286BP0CG31 522 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 SERPINB10P48595 397 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 INHBEP58166 350 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 DNAL1Q4LDG9 190 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 C10orf120Q5SQS8 335 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 BEND6Q5SZJ8 279 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 FAM47EQ6ZV65 393 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 CHSY1Q86X52 802 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 FAM9CQ8IZT9 166 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 SLC35G2Q8TBE7 412 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 COG1Q8WTW3 980 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 TADA1Q96BN2 335 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 SPATA17Q96L03 361 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 GPR63Q9BZJ6 419 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 KRCC1Q9NPI7 259 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 CD274Q9NZQ7 290 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 XPO7Q9UIA9 1087 aaKnown RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 YDJCA8MPS7 323 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 STRNO43815 780 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 FBXO21O94952 628 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 IRF1P10914 325 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 ATICP31939 592 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 ELAVL2Q12926 359 aaKnown RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 ZNF177Q13360 481 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 USP10Q14694 798 aaKnown RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 SEC23AQ15436 765 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 LY6KQ17RY6 165 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 AASDHQ4L235 1098 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 PPP4R4Q6NUP7 873 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 SLC30A10Q6XR72 485 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 SHCBP1Q8NEM2 672 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 SOCS4Q8WXH5 440 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 RIN2Q8WYP3 895 aaPredicted RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 PABPC5Q96DU9 382 aaKnown RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 HPDLQ96IR7 371 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 MCEEQ96PE7 176 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 TRABDQ9H4I3 376 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 KLHL11Q9NVR0 708 aa8.82□□□□□ -1
CTNND1-206ENST00000415361 UTP6Q9NYH9 597 aaKnown RBP8.82□□□□□ -1
CTNND1-206ENST00000415361 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.82□□□□□ -13e-9■□□□□ 10.4
CTNND1-206ENST00000415361 C16orf96A6NNT2 1141 aa8.81□□□□□ -1
CTNND1-206ENST00000415361 ZSCAN9O15535 394 aaPredicted RBP8.81□□□□□ -1
CTNND1-206ENST00000415361 CTDNEP1O95476 244 aa8.81□□□□□ -1
CTNND1-206ENST00000415361 SESN2P58004 480 aaPredicted RBP8.81□□□□□ -1
CTNND1-206ENST00000415361 ZNF200P98182 395 aaPredicted RBP8.81□□□□□ -1
CTNND1-206ENST00000415361 CNTN2Q02246 1040 aa8.81□□□□□ -1
CTNND1-206ENST00000415361 BYSLQ13895 437 aaKnown RBP8.81□□□□□ -1
CTNND1-206ENST00000415361 BOLA3Q53S33 107 aa8.81□□□□□ -1
CTNND1-206ENST00000415361 CCNJLQ8IV13 435 aa8.81□□□□□ -1
CTNND1-206ENST00000415361 TRIM48Q8IWZ4 208 aa8.81□□□□□ -1
CTNND1-206ENST00000415361 MRPL1Q9BYD6 325 aaKnown RBP8.81□□□□□ -1
CTNND1-206ENST00000415361 HMX1Q9NP08 348 aaPredicted RBP8.81□□□□□ -1
CTNND1-206ENST00000415361 LATS2Q9NRM7 1088 aa8.81□□□□□ -1
CTNND1-206ENST00000415361 GID8Q9NWU2 228 aa8.81□□□□□ -1
CTNND1-206ENST00000415361 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms