RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 TYRO3Q06418 890 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 INCA1Q0VD86 236 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 TWF1Q12792 350 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 MAN2A1Q16706 1144 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 PABPC1LQ4VXU2 614 aaKnown RBP15.62■□□□□ 0.09
LIMS1-206ENST00000414829 CYP4A22Q5TCH4 519 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 FAM171BQ6P995 826 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 ATAD1Q8NBU5 361 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 B3GALNT2Q8NCR0 500 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 MYCBPAPQ8TBZ2 947 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 NT5C1BQ96P26 610 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 MRPL45Q9BRJ2 306 aaKnown RBP15.62■□□□□ 0.09
LIMS1-206ENST00000414829 POMKQ9H5K3 350 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 ASAH2Q9NR71 780 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 NFE2L3Q9Y4A8 694 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 UNC80Q8N2C7 3258 aa15.62■□□□□ 0.09
LIMS1-206ENST00000414829 GTPBP10A4D1E9 387 aaKnown RBP15.61■□□□□ 0.09
LIMS1-206ENST00000414829 SEC24AO95486 1093 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 CAVIN2O95810 425 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 HAPLN1P10915 354 aaPredicted RBP15.61■□□□□ 0.09
LIMS1-206ENST00000414829 PTPN2P17706 415 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 FSHRP23945 695 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 ACAT1P24752 427 aaKnown RBP15.61■□□□□ 0.09
LIMS1-206ENST00000414829 SSTR3P32745 418 aaPredicted RBP15.61■□□□□ 0.09
LIMS1-206ENST00000414829 TAF12Q16514 161 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 PDZD4Q76G19 769 aaPredicted RBP15.61■□□□□ 0.09
LIMS1-206ENST00000414829 OSTM1Q86WC4 334 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 CREBRFQ8IUR6 639 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 GCNAQ96QF7 691 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 TMEM209Q96SK2 561 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 PKMYT1Q99640 499 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 PI4K2AQ9BTU6 479 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 NT5C1AQ9BXI3 368 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 TSC2P49815 1807 aa15.61■□□□□ 0.09
LIMS1-206ENST00000414829 TRIM66O15016 1216 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 MICAL2O94851 1124 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 PDGFRBP09619 1106 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 PTPN1P18031 435 aaKnown RBP15.6■□□□□ 0.09
LIMS1-206ENST00000414829 ANXA13P27216 316 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 PSMC1P62191 440 aaKnown RBP15.6■□□□□ 0.09
LIMS1-206ENST00000414829 CUL2Q13617 745 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 SCARA3Q6AZY7 606 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 SPOPLQ6IQ16 392 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 ENOSF1Q7L5Y1 443 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 GRASPQ7Z6J2 395 aaPredicted RBP15.6■□□□□ 0.09
LIMS1-206ENST00000414829 GJD3Q8N144 294 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 FAM200AQ8TCP9 573 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 SEMA4DQ92854 862 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 PSMG2Q969U7 264 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 MYLPFQ96A32 169 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 BPIFA3Q9BQP9 254 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 APOBEC3GQ9HC16 384 aaKnown RBP15.6■□□□□ 0.09
LIMS1-206ENST00000414829 GCNT4Q9P109 453 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 UXTQ9UBK9 157 aaPredicted RBP15.6■□□□□ 0.09
LIMS1-206ENST00000414829 ZMYM5Q9UJ78 669 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 GTF3C4Q9UKN8 822 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 SCN1AP35498 2009 aa15.6■□□□□ 0.09
LIMS1-206ENST00000414829 C19orf67A6NJJ6 358 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 KCNJ18B7U540 433 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 LOC730098B7Z3J9 87 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 CILPO75339 1184 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 RHOP08100 348 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 WEE2P0C1S8 567 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 CSH1P0DML2 217 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 CSH2P0DML3 217 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 LMO2P25791 158 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 NDST1P52848 882 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 CYP27A1Q02318 531 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 GCNT1Q02742 428 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 KCNJ12Q14500 433 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 MDH1BQ5I0G3 518 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 GBP6Q6ZN66 633 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 LRRTM3Q86VH5 581 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 ZDHHC14Q8IZN3 488 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 NXPE3Q969Y0 559 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 JAKMIP2Q96AA8 810 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 PCED1BQ96HM7 432 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 RPGRIP1Q96KN7 1286 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 MED15Q96RN5 788 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 TUBGCP2Q9BSJ2 902 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 MRPS23Q9Y3D9 190 aaKnown RBP15.59■□□□□ 0.09
LIMS1-206ENST00000414829 REV3LO60673 3130 aa15.59■□□□□ 0.09
LIMS1-206ENST00000414829 MYBPHLA2RUH7 354 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 SMTNL1A8MU46 457 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 VNN2O95498 520 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 CDC25CP30307 473 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 GBP2P32456 591 aaPredicted RBP15.58■□□□□ 0.08
LIMS1-206ENST00000414829 RAP1GAPP47736 663 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 EPHA5P54756 1037 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 CDH8P55286 799 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 TPM4P67936 248 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 EXOC3L4Q17RC7 722 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 TCP11X2Q5H9J9 407 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 GET4Q7L5D6 327 aaPredicted RBP15.58■□□□□ 0.08
LIMS1-206ENST00000414829 CRYBG2Q8N1P7 616 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 PPM1KQ8N3J5 372 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 SMARCD1Q96GM5 515 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 CORO1BQ9BR76 489 aa15.58■□□□□ 0.08
LIMS1-206ENST00000414829 GPR88Q9GZN0 384 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms