RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	FAM207A	Q9NSI2	230 aa	Predicted RBP	14.02	□□□□□ -0.17
SF1-206	ENST00000413725	DZANK1	Q9NVP4	752 aa		14.02	□□□□□ -0.17
SF1-206	ENST00000413725	HMGXB4	Q9UGU5	601 aa		14.02	□□□□□ -0.17
SF1-206	ENST00000413725	FBXW11	Q9UKB1	542 aa		14.02	□□□□□ -0.17
SF1-206	ENST00000413725	DNAJC12	Q9UKB3	198 aa		14.02	□□□□□ -0.17
SF1-206	ENST00000413725	NME7	Q9Y5B8	376 aa		14.02	□□□□□ -0.17
SF1-206	ENST00000413725	PCDHB5	Q9Y5E4	795 aa		14.02	□□□□□ -0.17
SF1-206	ENST00000413725	PCDHB4	Q9Y5E5	795 aa		14.02	□□□□□ -0.17
SF1-206	ENST00000413725	ATP8B3	O60423	1300 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725		A0A1W2PQC6	194 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	MTMR11	A4FU01	709 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	PRRG1	O14668	218 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	ATP2C2	O75185	946 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	KRT5	P13647	590 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	UCHL3	P15374	230 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	EPCAM	P16422	314 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	APBA1	Q02410	837 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	ADCY1	Q08828	1119 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	RAPGEF1	Q13905	1077 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	ARHGAP44	Q17R89	818 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	ZNF394	Q53GI3	561 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	MDH1B	Q5I0G3	518 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	SMYD5	Q6GMV2	418 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	FAM171B	Q6P995	826 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	GJB7	Q6PEY0	223 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	LILRA6	Q6PI73	481 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	TMEM270	Q6UE05	265 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	EP400NL	Q6ZTU2	488 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	CCDC149	Q6ZUS6	474 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	RTL10	Q7L3V2	364 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	ACOT1	Q86TX2	421 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	LRRTM3	Q86VH5	581 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	SPATA2L	Q8IUW3	424 aa	Predicted RBP	14.01	□□□□□ -0.17
SF1-206	ENST00000413725	CRYBG2	Q8N1P7	616 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	UBR7	Q8N806	425 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	KREMEN2	Q8NCW0	462 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	MYCBPAP	Q8TBZ2	947 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	PPM1E	Q8WY54	764 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	KAT5	Q92993	513 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	PABPC5	Q96DU9	382 aa	Known RBP	14.01	□□□□□ -0.17
SF1-206	ENST00000413725	PKMYT1	Q99640	499 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	ELOVL4	Q9GZR5	314 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	DPEP3	Q9H4B8	488 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	CYP4F11	Q9HBI6	524 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	CRTAC1	Q9NQ79	661 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	MAN1C1	Q9NR34	630 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	CLDND1	Q9NY35	253 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	ABI2	Q9NYB9	513 aa	Predicted RBP	14.01	□□□□□ -0.17
SF1-206	ENST00000413725	GTF3C4	Q9UKN8	822 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	FHOD1	Q9Y613	1164 aa		14.01	□□□□□ -0.17
SF1-206	ENST00000413725	OBSL1	O75147	1896 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	MYBPHL	A2RUH7	354 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	SPATA31D3	P0C874	917 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	KLK7	P49862	253 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	RAD23B	P54727	409 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	CYP27A1	Q02318	531 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	ORC1	Q13415	861 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	ADAM15	Q13444	863 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	KCNC3	Q14003	757 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	UVSSA	Q2YD98	709 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	IQCE	Q6IPM2	695 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	DPY19L2P1	Q6NXN4	242 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	TMEM184A	Q6ZMB5	413 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	SPATA31D4	Q6ZUB0	917 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	TCEAL8	Q8IYN2	117 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	MAFA	Q8NHW3	353 aa	Predicted RBP	14	□□□□□ -0.17
SF1-206	ENST00000413725	WHAMM	Q8TF30	809 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	SHC3	Q92529	594 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	MYLPF	Q96A32	169 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	TMEM176A	Q96HP8	235 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	FUBP3	Q96I24	572 aa	Known RBP eCLIP	14	□□□□□ -0.17
SF1-206	ENST00000413725	HEXIM2	Q96MH2	286 aa	Known RBP	14	□□□□□ -0.17
SF1-206	ENST00000413725	TWNK	Q96RR1	684 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	XPO4	Q9C0E2	1151 aa	Known RBP	14	□□□□□ -0.17
SF1-206	ENST00000413725	GAN	Q9H2C0	597 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	SFXN1	Q9H9B4	322 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	ABCB6	Q9NP58	842 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	HSFX1	Q9UBD0	423 aa		14	□□□□□ -0.17
SF1-206	ENST00000413725	EYS	Q5T1H1	3165 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	NOTCH4	Q99466	2003 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	LINC01565	O15544	149 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	SLC34A2	O95436	690 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	GLP2R	O95838	553 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	C8A	P07357	584 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	PAEP	P09466	180 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	ACO1	P21399	889 aa	Known RBP	13.99	□□□□□ -0.17
SF1-206	ENST00000413725	USP8	P40818	1118 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	TUFM	P49411	452 aa	Known RBP	13.99	□□□□□ -0.17
SF1-206	ENST00000413725	POLR2F	P61218	127 aa	Known RBP	13.99	□□□□□ -0.17
SF1-206	ENST00000413725	PLD1	Q13393	1074 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	COL19A1	Q14993	1142 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	CTC1	Q2NKJ3	1217 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	MGAT5B	Q3V5L5	792 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	CFAP221	Q4G0U5	840 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	PPM1L	Q5SGD2	360 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	SARM1	Q6SZW1	724 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	SLC4A11	Q8NBS3	891 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	ATAD1	Q8NBU5	361 aa		13.99	□□□□□ -0.17
SF1-206	ENST00000413725	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.99	□□□□□ -0.17
SF1-206	ENST00000413725	VN1R2	Q8NFZ6	395 aa		13.99	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms