RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 ZNF280DQ6N043 979 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 KIAA1841Q6NSI8 718 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 ALYREFQ86V81 257 aaKnown RBP9.53□□□□□ -0.88
HCG18-234ENST00000413358 VPS36Q86VN1 386 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 UNC93AQ86WB7 457 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 FAM71AQ8IYT1 594 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 THEM5Q8N1Q8 247 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 UBR7Q8N806 425 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 CCDC112Q8NEF3 446 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 KBTBD7Q8WVZ9 684 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 SYN2Q92777 582 aaPredicted RBP9.53□□□□□ -0.88
HCG18-234ENST00000413358 CLP1Q92989 425 aaKnown RBP9.53□□□□□ -0.88
HCG18-234ENST00000413358 TNIP3Q96KP6 325 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 HERC2P3Q9BVR0 1158 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 PLVAPQ9BX97 442 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 IGFLR1Q9H665 355 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 SEPT11Q9NVA2 429 aaKnown RBP9.53□□□□□ -0.88
HCG18-234ENST00000413358 DDX43Q9NXZ2 648 aaKnown RBP9.53□□□□□ -0.88
HCG18-234ENST00000413358 STK39Q9UEW8 545 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 CHD7Q9P2D1 2997 aa9.53□□□□□ -0.88
HCG18-234ENST00000413358 MUC3AQ02505 3323 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 H7C4K7 107 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 FGF18O76093 207 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 SOD2P04179 222 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 SERPING1P05155 500 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 PAEPP09466 180 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 FAM163BP0C2L3 166 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 ACAT1P24752 427 aaKnown RBP9.52□□□□□ -0.89
HCG18-234ENST00000413358 GNL1P36915 607 aaPredicted RBP9.52□□□□□ -0.89
HCG18-234ENST00000413358 GLUD2P49448 558 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 ZNF132P52740 706 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 PSMC1P62191 440 aaKnown RBP9.52□□□□□ -0.89
HCG18-234ENST00000413358 TSPY1Q01534 308 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 ZP2Q05996 745 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 ARID5BQ14865 1188 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 USP41Q3LFD5 358 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.89
HCG18-234ENST00000413358 SMYD5Q6GMV2 418 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 CD300LGQ6UXG3 332 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 CYP26C1Q6V0L0 522 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 OSTM1Q86WC4 334 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 TRIM44Q96DX7 344 aaPredicted RBP9.52□□□□□ -0.89
HCG18-234ENST00000413358 TMEM176AQ96HP8 235 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 TWNKQ96RR1 684 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 BAG1Q99933 345 aaPredicted RBP9.52□□□□□ -0.89
HCG18-234ENST00000413358 SYT15Q9BQS2 421 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 TTPALQ9BTX7 342 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 GPR62Q9BZJ7 368 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 ELOVL4Q9GZR5 314 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 PDCL3Q9H2J4 239 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 AIPL1Q9NZN9 384 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 CEP83Q9Y592 693 aa9.52□□□□□ -0.89
HCG18-234ENST00000413358 C2CD2LO14523 706 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 MED7O43513 233 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 HCRTO43612 131 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 CSPG5O95196 566 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 IPO7O95373 1038 aaKnown RBP9.51□□□□□ -0.89
HCG18-234ENST00000413358 PDGFRBP09619 1106 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 SKILP12757 684 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 CPB1P15086 417 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 CYP11B1P15538 503 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 FGFR3P22607 806 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 BRD2P25440 801 aaKnown RBP9.51□□□□□ -0.89
HCG18-234ENST00000413358 HNRNPH3P31942 346 aaKnown RBP9.51□□□□□ -0.89
HCG18-234ENST00000413358 PRKCIP41743 596 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 NDUFV1P49821 464 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 RAD23BP54727 409 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 BMS1Q14692 1282 aaKnown RBP9.51□□□□□ -0.89
HCG18-234ENST00000413358 CLUL1Q15846 466 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 MEA1Q16626 185 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 CTXN3Q4LDR2 81 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 SGO2Q562F6 1265 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 TAF3Q5VWG9 929 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 ANKS3Q6ZW76 656 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 LIMS2Q7Z4I7 341 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 DDX53Q86TM3 631 aaKnown RBP9.51□□□□□ -0.89
HCG18-234ENST00000413358 ACOT1Q86TX2 421 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 SLC47A2Q86VL8 602 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 KLHL23Q8NBE8 558 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 SLC4A11Q8NBS3 891 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 B3GALNT2Q8NCR0 500 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 MICAL1Q8TDZ2 1067 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 RIN2Q8WYP3 895 aaPredicted RBP9.51□□□□□ -0.89
HCG18-234ENST00000413358 B3GALT6Q96L58 329 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 CCDC42Q96M95 316 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 HEXIM2Q96MH2 286 aaKnown RBP9.51□□□□□ -0.89
HCG18-234ENST00000413358 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.51□□□□□ -0.89
HCG18-234ENST00000413358 DPEP3Q9H4B8 488 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 HAUS4Q9H6D7 363 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 FAM49BQ9NUQ9 324 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 CD207Q9UJ71 328 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 CDH9Q9ULB4 789 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 CNTN6Q9UQ52 1028 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 BZW2Q9Y6E2 419 aaKnown RBP9.51□□□□□ -0.89
HCG18-234ENST00000413358 ATP8B3O60423 1300 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 NLRC5Q86WI3 1866 aa9.51□□□□□ -0.89
HCG18-234ENST00000413358 SSU72P8A0A1W2PR75 194 aa9.5□□□□□ -0.89
HCG18-234ENST00000413358 OR6C75A6NL08 312 aa9.5□□□□□ -0.89
HCG18-234ENST00000413358 M0QYV0 167 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms