RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 TSPY1Q01534 308 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 BFSP1Q12934 665 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 CCINQ13939 588 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 MAB21L3Q8N8X9 362 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 NETO1Q8TDF5 533 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 MRPL44Q9H9J2 332 aaKnown RBP20.09■□□□□ 0.81
ITGA6-204ENST00000412899 C2orf42Q9NWW7 574 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 STK17AQ9UEE5 414 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 CFAP45Q9UL16 551 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 EXOC7Q9UPT5 735 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 SCN1AP35498 2009 aa20.09■□□□□ 0.81
ITGA6-204ENST00000412899 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.08■□□□□ 0.81
ITGA6-204ENST00000412899 PRPF40AO75400 957 aaKnown RBP20.08■□□□□ 0.81
ITGA6-204ENST00000412899 PNPLA4P41247 253 aa20.08■□□□□ 0.81
ITGA6-204ENST00000412899 NLRP12P59046 1061 aa20.08■□□□□ 0.81
ITGA6-204ENST00000412899 TFAMQ00059 246 aaKnown RBP20.08■□□□□ 0.81
ITGA6-204ENST00000412899 DNM1Q05193 864 aaKnown RBP20.08■□□□□ 0.81
ITGA6-204ENST00000412899 CCDC73Q6ZRK6 1079 aa20.08■□□□□ 0.81
ITGA6-204ENST00000412899 PI4K2AQ9BTU6 479 aa20.08■□□□□ 0.81
ITGA6-204ENST00000412899 SEL1LQ9UBV2 794 aa20.08■□□□□ 0.81
ITGA6-204ENST00000412899 MAGED2Q9UNF1 606 aaPredicted RBP20.08■□□□□ 0.81
ITGA6-204ENST00000412899 CUTAO60888 179 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 F11P03951 625 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 DDX6P26196 483 aaKnown RBP eCLIP20.07■□□□□ 0.8
ITGA6-204ENST00000412899 ADSSP30520 456 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 STAT6P42226 847 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 RUNX3Q13761 415 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 CSRP2Q16527 193 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 NFE2Q16621 373 aaPredicted RBP20.07■□□□□ 0.8
ITGA6-204ENST00000412899 PRR23CQ6ZRP0 262 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 MRPS31Q92665 395 aaKnown RBP20.07■□□□□ 0.8
ITGA6-204ENST00000412899 ACCSQ96QU6 501 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 FAM213AQ9BRX8 229 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 TBC1D7Q9P0N9 293 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 ZDHHC9Q9Y397 364 aa20.07■□□□□ 0.8
ITGA6-204ENST00000412899 TCHHQ07283 1943 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 PPP1R37O75864 691 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 LDHAP00338 332 aaKnown RBP20.06■□□□□ 0.8
ITGA6-204ENST00000412899 ITGB3P05106 788 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 CSH1P0DML2 217 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 CSH2P0DML3 217 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 HMGA1P17096 107 aaKnown RBP20.06■□□□□ 0.8
ITGA6-204ENST00000412899 GAP43P17677 238 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 POLR2BP30876 1174 aaKnown RBP20.06■□□□□ 0.8
ITGA6-204ENST00000412899 HOXA6P31267 233 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 GPR15P49685 360 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 KCNA1Q09470 495 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 GRSF1Q12849 480 aaKnown RBP eCLIP20.06■□□□□ 0.8
ITGA6-204ENST00000412899 TXNDC8Q6A555 127 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 CC2D1AQ6P1N0 951 aaPredicted RBP20.06■□□□□ 0.8
ITGA6-204ENST00000412899 SV2BQ7L1I2 683 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 TMEM150AQ86TG1 271 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 WDR5BQ86VZ2 330 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 FAM160A2Q8N612 972 aaPredicted RBP20.06■□□□□ 0.8
ITGA6-204ENST00000412899 PDILTQ8N807 584 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 CACTINQ8WUQ7 758 aaKnown RBP20.06■□□□□ 0.8
ITGA6-204ENST00000412899 USP13Q92995 863 aaPredicted RBP20.06■□□□□ 0.8
ITGA6-204ENST00000412899 SAAL1Q96ER3 474 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 CNTNAP3BQ96NU0 1288 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 FAM83CQ9BQN1 747 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 CNTNAP3Q9BZ76 1288 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 EBF3Q9H4W6 596 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 KIF9Q9HAQ2 790 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 TDP1Q9NUW8 608 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 TMLHEQ9NVH6 421 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 AGAP1Q9UPQ3 857 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 CCL26Q9Y258 94 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 FRYLO94915 3013 aa20.06■□□□□ 0.8
ITGA6-204ENST00000412899 WDR87Q6ZQQ6 2873 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 A0A087X0B3 334 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 SLC30A4O14863 429 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 EXTL3O43909 919 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 HUS1O60921 280 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 GCNT3O95395 438 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 HOXC13P31276 330 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 ME1P48163 572 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 AMPD2Q01433 879 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 L1TD1Q5T7N2 865 aaKnown RBP20.05■□□□□ 0.8
ITGA6-204ENST00000412899 TRIM68Q6AZZ1 485 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 BRSK2Q8IWQ3 736 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 SYCP3Q8IZU3 236 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 PDCL2Q8N4E4 241 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 STKLD1Q8NE28 680 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 STRA6Q9BX79 667 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 HPS4Q9NQG7 708 aa20.05■□□□□ 0.8
ITGA6-204ENST00000412899 DDX43Q9NXZ2 648 aaKnown RBP20.05■□□□□ 0.8
ITGA6-204ENST00000412899 DNAH14Q0VDD8 3507 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 MYMKA6NI61 221 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 FOXD2O60548 495 aaPredicted RBP20.04■□□□□ 0.8
ITGA6-204ENST00000412899 ATG13O75143 517 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 IDEP14735 1019 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 WNT7BP56706 349 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 RPL10AP62906 217 aaKnown RBP20.04■□□□□ 0.8
ITGA6-204ENST00000412899 MYL7Q01449 175 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 TMEM196Q5HYL7 178 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 SDHAF4Q5VUM1 108 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 MON1AQ86VX9 555 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 CSGALNACT2Q8N6G5 542 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 C1orf127Q8N9H9 656 aa20.04■□□□□ 0.8
ITGA6-204ENST00000412899 NOC3LQ8WTT2 800 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms