RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ABCD1P33897 745 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 PTPN20Q4JDL3 420 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 PRSS55Q6UWB4 352 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-203ENST00000412570 SAE1Q9UBE0 346 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-203ENST00000412570 PPME1Q9Y570 386 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 MYO1FO00160 1098 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 TKTP29401 623 aaKnown RBP10.3□□□□□ -0.76
SMPD4-203ENST00000412570 FAM193AP78312 1265 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 NME3Q13232 169 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 BFSP2Q13515 415 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 CLEC16AQ2KHT3 1053 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 PMF1Q6P1K2 205 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 TPCN2Q8NHX9 752 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 WHAMMQ8TF30 809 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 IFT81Q8WYA0 676 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 SELENOOQ9BVL4 669 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 NFKBIZQ9BYH8 718 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 EDEM3Q9BZQ6 932 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 MCOLN1Q9GZU1 580 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 PAK6Q9NQU5 681 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-203ENST00000412570 TMPRSS4Q9NRS4 437 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 ITGA11Q9UKX5 1188 aa10.3□□□□□ -0.76
SMPD4-203ENST00000412570 RTN2O75298 545 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 CABYRO75952 493 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 SEC31AO94979 1220 aaKnown RBP10.29□□□□□ -0.76
SMPD4-203ENST00000412570 IGHA2P01877 340 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 KRT10P13645 584 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 GPR15P49685 360 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 MAPK8IP2Q13387 824 aaPredicted RBP10.29□□□□□ -0.76
SMPD4-203ENST00000412570 TXNRD3NBQ6F5E7 133 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 KIAA1841Q6NSI8 718 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 TTC9BQ8N6N2 239 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 TRIM58Q8NG06 486 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 DDX1Q92499 740 aaKnown RBP10.29□□□□□ -0.76
SMPD4-203ENST00000412570 OSBPL9Q96SU4 736 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 TLR10Q9BXR5 811 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 ZNF518BQ9C0D4 1074 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 TBC1D13Q9NVG8 400 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 PRKAG2Q9UGJ0 569 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 A0A0U1RQF3 1178 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 ENPP3O14638 875 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 MAPK13O15264 365 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 ERBB2P04626 1255 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 RFC1P35251 1148 aaPredicted RBP10.29□□□□□ -0.76
SMPD4-203ENST00000412570 CACNA2D1P54289 1103 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 MGAT3Q09327 533 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 PPP6R3Q5H9R7 873 aaPredicted RBP10.29□□□□□ -0.76
SMPD4-203ENST00000412570 ACAD10Q6JQN1 1059 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 SLC24A5Q71RS6 500 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 ATAD1Q8NBU5 361 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 TMEM35BQ8NCS4 154 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 CFAP57Q96MR6 1250 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 DDX47Q9H0S4 455 aaKnown RBP10.29□□□□□ -0.76
SMPD4-203ENST00000412570 KRT82Q9NSB4 513 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 AMFRQ9UKV5 643 aa10.29□□□□□ -0.76
SMPD4-203ENST00000412570 ANKRD62A6NC57 917 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 GRXCR1A8MXD5 290 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 CILPO75339 1184 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 FGGP02679 453 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 CPB1P15086 417 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 TFE3P19532 575 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-203ENST00000412570 PRKCIP41743 596 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 KCNJ1P48048 391 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 CDC42EP1Q00587 391 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 DDR2Q16832 855 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 GLIPR1L2Q4G1C9 344 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 FBXO46Q6PJ61 603 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-203ENST00000412570 FOXR2Q6PJQ5 311 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 EP400NLQ6ZTU2 488 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 MCOLN2Q8IZK6 566 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 WDTC1Q8N5D0 677 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 HDAC7Q8WUI4 952 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 ATG4AQ8WYN0 398 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 SEPT8Q92599 483 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 ZNF333Q96JL9 665 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 KRT12Q99456 494 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 SEPT5Q99719 369 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-203ENST00000412570 BARX2Q9UMQ3 279 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-203ENST00000412570 C2CD2Q9Y426 696 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 NR2E1Q9Y466 385 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 TCRBV7S2A1N4TA0A589 114 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 CTAGE15A4D2H0 777 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 HMBSP08397 361 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 CTAGE8P0CG41 777 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 NOMO3P69849 1222 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 PLCB3Q01970 1234 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 SMAD1Q15797 465 aaKnown RBP10.28□□□□□ -0.76
SMPD4-203ENST00000412570 TRIM71Q2Q1W2 868 aaKnown RBP10.28□□□□□ -0.76
SMPD4-203ENST00000412570 SLC39A12Q504Y0 691 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 NOMO2Q5JPE7 1267 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 KIAA0319Q5VV43 1072 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 TAS1R1Q7RTX1 841 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 CTAGE6Q86UF2 777 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 TTC30AQ86WT1 665 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 CTAGE4Q8IX94 777 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 TSGA10Q9BZW7 698 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 DNAJC17Q9NVM6 304 aaKnown RBP10.28□□□□□ -0.76
SMPD4-203ENST00000412570 TRIM43BA6NCK2 446 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 CYP2F1P24903 491 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 PSMA2P25787 234 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms