RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 TXLNGYQ9BZA5 131 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 IMPG2Q9BZV3 1241 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 MRPL40Q9NQ50 206 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 INTS9Q9NV88 658 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 EHD3Q9NZN3 535 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 CAPN11Q9UMQ6 739 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 ARHGAP26Q9UNA1 814 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 HYOU1Q9Y4L1 999 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 PCDHA5Q9Y5H7 936 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.48□□□□□ -1.53
HERC4-205ENST00000412272 ATP8B3O60423 1300 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 USP54Q70EL1 1684 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 A0A1B0GUL6 1792 aa5.48□□□□□ -1.53
HERC4-205ENST00000412272 STMND1H3BQB6 276 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TEX33O43247 280 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 HOXC11O43248 304 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 TAF5LO75529 589 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SULT1C4O75897 302 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 HNRNPH3P31942 346 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 POU3F4P49335 361 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 S100A12P80511 92 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 COL9A3Q14050 684 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 KIAA1841Q6NSI8 718 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 C8orf74Q6P047 294 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 NET1Q7Z628 596 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 CROCCP2Q86T23 111 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 PRUNE1Q86TP1 453 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 AGGF1Q8N302 714 aaeCLIP5.47□□□□□ -1.53
HERC4-205ENST00000412272 NKAIN3Q8N8D7 197 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 Q8N9G6 341 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 GALNT11Q8NCW6 608 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TTC9Q92623 222 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 PGM2Q96G03 612 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 CAPZA3Q96KX2 299 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 CCDC138Q96M89 665 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 VPS11Q9H270 941 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 RXFP1Q9HBX9 757 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 PCDH12Q9NPG4 1184 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TNFRSF10DQ9UBN6 386 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 CPSF3Q9UKF6 684 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 HPS5Q9UPZ3 1129 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 EDC4Q6P2E9 1401 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 A0A1W2PQJ5 194 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 CCRL2O00421 344 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SLC22A1O15245 554 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ENTPD5O75356 428 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 USP1O94782 785 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ECDO95905 644 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 CAPN1P07384 714 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 APEHP13798 732 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 DNAJB2P25686 324 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 PKLRP30613 574 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ARHGDIAP52565 204 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 POU6F2P78424 691 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 PNOCQ13519 176 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 C16orf72Q14CZ0 275 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ZACNQ401N2 412 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 FIGNQ5HY92 759 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 HYIQ5T013 277 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 PAOXQ6QHF9 649 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SLC4A10Q6U841 1118 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 BNC2Q6ZN30 1099 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 STOX1Q6ZVD7 989 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SH3RF1Q7Z6J0 888 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ZER1Q7Z7L7 766 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 CCDC28AQ8IWP9 274 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ZFP28Q8NHY6 868 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 DACT3Q96B18 629 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 AIDAQ96BJ3 306 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SGF29Q96ES7 293 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TARS2Q9BW92 718 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 UCK1Q9HA47 277 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ETNK1Q9HBU6 452 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 MAD1L1Q9Y6D9 718 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 MYH1P12882 1939 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 CYP3A7-CYP3A51PA0A087WV96 503 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 GOLGA8QA0A0J9YX86 632 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 A0A1B0GWJ7 208 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SLC12A8A0AV02 714 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 GOLGA8OA6NCC3 632 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 DCDC2CA8MYV0 355 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 HNRNPCL2B2RXH8 293 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 GOLGA8NF8WBI6 632 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 KPNA5O15131 536 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SHOXO15266 292 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 HNRNPCL1O60812 293 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 CLN5O75503 358 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ZNF16P17020 682 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 CYP3A7P24462 503 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 GSTM2P28161 218 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ACSL1P33121 698 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ETV1P50549 477 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 LIMK1P53667 647 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SRP54P61011 504 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 COG7P83436 770 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 PPARDQ03181 441 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SLC9C2Q5TAH2 1124 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 HGSNATQ68CP4 663 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 HHIPL2Q6UWX4 724 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 DPP9Q86TI2 863 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms