RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 LNX1Q8TBB1 728 aaPredicted RBP9.35□□□□□ -0.91
LINC02539-201ENST00000411615 POF1BQ8WVV4 589 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 BAP1Q92560 729 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 SYN2Q92777 582 aaPredicted RBP9.35□□□□□ -0.91
LINC02539-201ENST00000411615 TNIP3Q96KP6 325 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 SPAG5Q96R06 1193 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 ARID3AQ99856 593 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 MRPL45Q9BRJ2 306 aaKnown RBP9.35□□□□□ -0.91
LINC02539-201ENST00000411615 NT5C1AQ9BXI3 368 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 ZNF576Q9H609 170 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 SMYD3Q9H7B4 428 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 TLR9Q9NR96 1032 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 MRPL17Q9NRX2 175 aaKnown RBP9.35□□□□□ -0.91
LINC02539-201ENST00000411615 AIPL1Q9NZN9 384 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 LMCD1Q9NZU5 365 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 MTRRQ9UBK8 725 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 CDH9Q9ULB4 789 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 MAFFQ9ULX9 164 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 FHOD1Q9Y613 1164 aa9.35□□□□□ -0.91
LINC02539-201ENST00000411615 LAMA2P24043 3122 aaKnown RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 F8VZ95 297 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 FOXN3O00409 490 aaPredicted RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 GRM6O15303 877 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 CLSTN1O94985 981 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 CXCL14O95715 111 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 GYPCP04921 128 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 HNRNPH3P31942 346 aaKnown RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 SOX5P35711 763 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 STAT1P42224 750 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 NDST1P52848 882 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 RAD23BP54727 409 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 APBA1Q02410 837 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 CAMK1Q14012 370 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 SMC1AQ14683 1233 aaKnown RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 MAPRE1Q15691 268 aaKnown RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 PTPROQ16827 1216 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 CTXN3Q4LDR2 81 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 RTP2Q5QGT7 225 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 SLC8B1Q6J4K2 584 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 FAM171BQ6P995 826 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 GJB7Q6PEY0 223 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 TMC7Q7Z402 723 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 CEP57Q86XR8 500 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 DRC7Q8IY82 874 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 DCP1BQ8IZD4 617 aaKnown RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 WHAMMQ8TF30 809 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 RIN2Q8WYP3 895 aaPredicted RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 ANP32BQ92688 251 aaKnown RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 KAT5Q92993 513 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 TMEM176AQ96HP8 235 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 RTP3Q9BQQ7 232 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 GPR88Q9GZN0 384 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 ALG13Q9NP73 1137 aaKnown RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 DDX43Q9NXZ2 648 aaKnown RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 HSFX1Q9UBD0 423 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 AJAP1Q9UKB5 411 aaPredicted RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 LUC7L2Q9Y383 392 aaKnown RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 PCDHB4Q9Y5E5 795 aa9.34□□□□□ -0.91
LINC02539-201ENST00000411615 TIMM13Q9Y5L4 95 aaPredicted RBP9.34□□□□□ -0.91
LINC02539-201ENST00000411615 A8MXQ7 604 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 LCE2BO14633 110 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 CFHP08603 1231 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 VDRP11473 427 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 FERP16591 822 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 PTPN1P18031 435 aaKnown RBP9.33□□□□□ -0.92
LINC02539-201ENST00000411615 POU3F3P20264 500 aaPredicted RBP9.33□□□□□ -0.92
LINC02539-201ENST00000411615 DNAJB1P25685 340 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 LMO2P25791 158 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 PRKCIP41743 596 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 RAP1GAPP47736 663 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 ERVFC1P60507 584 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 TSPY1Q01534 308 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 PTK2Q05397 1052 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 GPR17Q13304 367 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 RAPGEF1Q13905 1077 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 RAB33AQ14088 237 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 STILQ15468 1287 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 PTPN14Q15678 1187 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 PSMD5Q16401 504 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 NFE2Q16621 373 aaPredicted RBP9.33□□□□□ -0.92
LINC02539-201ENST00000411615 MEA1Q16626 185 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 ARHGAP44Q17R89 818 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 INTS6LQ5JSJ4 861 aaKnown RBP9.33□□□□□ -0.92
LINC02539-201ENST00000411615 TPGS2Q68CL5 300 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 ARHGAP17Q68EM7 881 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 TMEM270Q6UE05 265 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 SCARA5Q6ZMJ2 495 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 RTL10Q7L3V2 364 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 TMC6Q7Z403 805 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 METTL3Q86U44 580 aaKnown RBP9.33□□□□□ -0.92
LINC02539-201ENST00000411615 OSTM1Q86WC4 334 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 CNGA4Q8IV77 575 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 SLC4A11Q8NBS3 891 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 RBBP8NLQ8NC74 664 aaPredicted RBP9.33□□□□□ -0.92
LINC02539-201ENST00000411615 B3GALNT2Q8NCR0 500 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 OR8K1Q8NGG5 319 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 MYCBPAPQ8TBZ2 947 aa9.33□□□□□ -0.92
LINC02539-201ENST00000411615 C2orf15Q8WU43 125 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms