RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 PTK7Q13308 1070 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 CNGA2Q16280 664 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 LLGL2Q6P1M3 1020 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 PHLDB2Q86SQ0 1253 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 ERICH1Q86X53 443 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 ZNF560Q96MR9 790 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 KRT12Q99456 494 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 NT5C1AQ9BXI3 368 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 HIPK3Q9H422 1215 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 KLK14Q9P0G3 267 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 DMGDHQ9UI17 866 aaKnown RBP14.92□□□□□ -0.02
LIMS2-206ENST00000409754 STRIP2Q9ULQ0 834 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.92□□□□□ -0.02
LIMS2-206ENST00000409754 PTPRSQ13332 1948 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 GPR182O15218 404 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 CTSHP09668 335 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 CKBP12277 381 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 TNFRSF8P28908 595 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 MARCKSL1P49006 195 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 RWDD2BP57060 319 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 TAP1Q03518 808 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 PPP2R5EQ16537 467 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 TCTN1Q2MV58 587 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 MAP9Q49MG5 647 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 SGO2Q562F6 1265 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 SEL1L2Q5TEA6 688 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 CCNI2Q6ZMN8 369 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-206ENST00000409754 CPNE8Q86YQ8 564 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 HACE1Q8IYU2 909 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 HDAC7Q8WUI4 952 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 BADQ92934 168 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 SCLYQ96I15 445 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 HEXIM2Q96MH2 286 aaKnown RBP14.92□□□□□ -0.02
LIMS2-206ENST00000409754 TRIM7Q9C029 511 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 SNX9Q9Y5X1 595 aa14.92□□□□□ -0.02
LIMS2-206ENST00000409754 CHD9Q3L8U1 2897 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 O00370 1275 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 MICAL2O94851 1124 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 TIMP1P01033 207 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 THPOP40225 353 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 MAGEA10P43363 369 aaPredicted RBP14.91□□□□□ -0.02
LIMS2-206ENST00000409754 CCL23P55773 120 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 GSCP56915 257 aaPredicted RBP14.91□□□□□ -0.02
LIMS2-206ENST00000409754 ZNF211Q13398 564 aaPredicted RBP14.91□□□□□ -0.02
LIMS2-206ENST00000409754 ORC1Q13415 861 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 STILQ15468 1287 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 FBXO47Q5MNV8 452 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 ZNF618Q5T7W0 954 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 DNAJC24Q6P3W2 148 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 UNC93AQ86WB7 457 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 C3orf20Q8ND61 904 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.91□□□□□ -0.02
LIMS2-206ENST00000409754 AP1M1Q9BXS5 423 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 PRO3102Q9H379 93 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 SLITRK6Q9H5Y7 841 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 FAM105AQ9NUU6 356 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 GDAP2Q9NXN4 497 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 IP6K2Q9UHH9 426 aa14.91□□□□□ -0.02
LIMS2-206ENST00000409754 GOLGA6L10A0A0M3HER8 536 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 TMEM191CA6NGB0 347 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 LRPAP1P30533 357 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 SLC7A5Q01650 507 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 NFX1Q12986 1120 aaKnown RBP14.9□□□□□ -0.02
LIMS2-206ENST00000409754 PTPN20Q4JDL3 420 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 FAM26DQ5JW98 314 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 PPP1R15BQ5SWA1 713 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 LCLAT1Q6UWP7 414 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 C16orf59Q7L2K0 433 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 KLHL7Q8IXQ5 586 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 GDF15Q99988 308 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 MRPL45Q9BRJ2 306 aaKnown RBP14.9□□□□□ -0.02
LIMS2-206ENST00000409754 PLVAPQ9BX97 442 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 ERVK-5Q9HDB9 667 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 WDR35Q9P2L0 1181 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 CYTH4Q9UIA0 394 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 L1RE1Q9UN81 338 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.9□□□□□ -0.02
LIMS2-206ENST00000409754 SCN1AP35498 2009 aa14.9□□□□□ -0.02
LIMS2-206ENST00000409754 M0QYV0 167 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 PTGESO14684 152 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 SART1O43290 800 aaKnown RBP14.89□□□□□ -0.03
LIMS2-206ENST00000409754 RAD51CO43502 376 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 PSTPIP1O43586 416 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 NBNO60934 754 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 CAND2O75155 1236 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 ZMYND10O75800 440 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 HEXIM1O94992 359 aaKnown RBP14.89□□□□□ -0.03
LIMS2-206ENST00000409754 PYGMP11217 842 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 ITGA4P13612 1032 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 CSF2RAP15509 400 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 TAF6P49848 677 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 SOX4Q06945 474 aaPredicted RBP14.89□□□□□ -0.03
LIMS2-206ENST00000409754 SV2CQ496J9 727 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 IFT20Q8IY31 132 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 PPP1R10Q96QC0 940 aaKnown RBP14.89□□□□□ -0.03
LIMS2-206ENST00000409754 TRAIPQ9BWF2 469 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 FUT8Q9BYC5 575 aa14.89□□□□□ -0.03
LIMS2-206ENST00000409754 AGO3Q9H9G7 860 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms