RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 EGFP01133 1207 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 PIGRP01833 764 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 F11P03951 625 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 ATF6P18850 670 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 HOXC13P31276 330 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 MYH11P35749 1972 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 TAF6P49848 677 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 TOB1P50616 345 aaPredicted RBP13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 SLC12A3P55017 1021 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 NLRP12P59046 1061 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 TSPY1Q01534 308 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 NFE2Q16621 373 aaPredicted RBP13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 MON1AQ86VX9 555 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 ATP2A3Q93084 1043 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 HHIPQ96QV1 700 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 BACH2Q9BYV9 841 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 SMOC1Q9H4F8 434 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 UPF2Q9HAU5 1272 aaKnown RBP13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 ABI2Q9NYB9 513 aaPredicted RBP13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 CPSF3Q9UKF6 684 aaKnown RBP13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 C2CD2Q9Y426 696 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 PCDHB5Q9Y5E4 795 aa13.26□□□□□ -0.29
APOBEC3B-204ENST00000407298 ANKRD11Q6UB99 2663 aaPredicted RBP13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 C4orf47A7E2U8 309 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 PPEF2O14830 753 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 KHNYNO15037 678 aaKnown RBP13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 SLC26A4O43511 780 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 CEACAM1P13688 526 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 GBP1P32455 592 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 RPL10AP62906 217 aaKnown RBP13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 POU5F1Q01860 360 aaKnown RBP13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 DMC1Q14565 340 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 IL17AQ16552 155 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 TRIM68Q6AZZ1 485 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 SLFN12LQ6IEE8 588 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 TMEM130Q8N3G9 435 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 MYCT1Q8N699 235 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 KDF1Q8NAX2 398 aaPredicted RBP13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 RPLP0P6Q8NHW5 317 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 CD101Q93033 1021 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 PYM1Q9BRP8 204 aaKnown RBP13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 CCSER1Q9C0I3 900 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 DUS2Q9NX74 493 aaKnown RBP13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 CCL26Q9Y258 94 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 KIF3AQ9Y496 699 aa13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 KIF26AQ9ULI4 1882 aaPredicted RBP13.25□□□□□ -0.29
APOBEC3B-204ENST00000407298 OTOL1A6NHN0 477 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 K7ENM7 598 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 FAM189A1O60320 539 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 FAM13AO94988 1023 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 USP17L7P0C7H9 530 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 ARSAP15289 507 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 CSRP1P21291 193 aaKnown RBP13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 GJA4P35212 333 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 PNPLA4P41247 253 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 IFNAR2P48551 515 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 DGKEP52429 567 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 ZNF252P-AS1Q0IIN9 211 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 PSMD2Q13200 908 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 SV2CQ496J9 727 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 RILPL1Q5EBL4 403 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 TXNDC8Q6A555 127 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 OSCP1Q8WVF1 389 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 TMEM206Q9H813 350 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 ECT2Q9H8V3 914 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 PARVGQ9HBI0 331 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 TMEM9BQ9NQ34 198 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 DPP3Q9NY33 737 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 ZMIZ1Q9ULJ6 1067 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 MAGED2Q9UNF1 606 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 ATG2BQ96BY7 2078 aa13.24□□□□□ -0.29
APOBEC3B-204ENST00000407298 ZNF638Q14966 1978 aaKnown RBP13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 TRAV19A0A0A6YYK7 116 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 KPNA7A9QM74 516 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 PRPF40AO75400 957 aaKnown RBP13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 NFICP08651 508 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 HMGA1P17096 107 aaKnown RBP13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 NMT1P30419 496 aaKnown RBP13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 PDE6CP51160 858 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 FAM160A1Q05DH4 1040 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 FOXC1Q12948 553 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 MTF1Q14872 753 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 ARSHQ5FYA8 562 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 WSCD1Q658N2 575 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 ARL6IP4Q66PJ3 421 aaKnown RBP13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 TCEAL6Q6IPX3 200 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 TMEM150AQ86TG1 271 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 LRRTM3Q86VH5 581 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 NT5DC4Q86YG4 428 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 FSIP1Q8NA03 581 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 TSTD1Q8NFU3 115 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 TCEAL3Q969E4 200 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 CHFRQ96EP1 664 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 CALML4Q96GE6 196 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 ZNF560Q96MR9 790 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 PNMA5Q96PV4 448 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 PLIN2Q99541 437 aa13.23□□□□□ -0.29
APOBEC3B-204ENST00000407298 FBRSL1Q9HCM7 1045 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms