RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 LILRA4P59901 499 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 FAM189BP81408 668 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 C1QBPQ07021 282 aaKnown RBP22.29■■□□□ 1.16
TPM1-208ENST00000404484 PTPRSQ13332 1948 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 SGO2Q562F6 1265 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 GLB1LQ6UWU2 654 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 MCOLN2Q8IZK6 566 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 APPL2Q8NEU8 664 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 UROC1Q96N76 676 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 GUCD1Q96NT3 240 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 MYH10P35580 1976 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 GBF1Q92538 1859 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 ENC1O14682 589 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 PRLRP16471 622 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 AMPD2Q01433 879 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 GRIN2CQ14957 1233 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 WHAMMP3Q1A5X7 153 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 PASD1Q8IV76 773 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 LINC01599Q8WXQ3 324 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 CPA5Q8WXQ8 436 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 TFAP2BQ92481 460 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 HEXIM2Q96MH2 286 aaKnown RBP22.29■■□□□ 1.16
TPM1-208ENST00000404484 RAD9AQ99638 391 aa22.29■■□□□ 1.16
TPM1-208ENST00000404484 RNF216Q9NWF9 866 aaPredicted RBP22.29■■□□□ 1.16
TPM1-208ENST00000404484 CNOT8Q9UFF9 292 aaKnown RBP22.29■■□□□ 1.16
TPM1-208ENST00000404484 LCHNA4D1U4 455 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 PODXLO00592 558 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 ARHGEF15O94989 841 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 UPP2O95045 317 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 CALB1P05937 261 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 TCP1P17987 556 aaKnown RBP22.28■■□□□ 1.16
TPM1-208ENST00000404484 CNGA2Q16280 664 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 SOWAHAQ2M3V2 549 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 MON1BQ7L1V2 547 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 LIMS2Q7Z4I7 341 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 LRRC57Q8N9N7 239 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 MSANTD4Q8NCY6 345 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 URGCPQ8TCY9 931 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 TWNKQ96RR1 684 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 MRPL45Q9BRJ2 306 aaKnown RBP22.28■■□□□ 1.16
TPM1-208ENST00000404484 SNX25Q9H3E2 840 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 ELAC1Q9H777 363 aaKnown RBP22.28■■□□□ 1.16
TPM1-208ENST00000404484 ADAM22Q9P0K1 906 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 HMGXB4Q9UGU5 601 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 SNX12Q9UMY4 172 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 HYOU1Q9Y4L1 999 aa22.28■■□□□ 1.16
TPM1-208ENST00000404484 TUSC3Q13454 348 aa22.27■■□□□ 1.16
TPM1-208ENST00000404484 SLFN11Q7Z7L1 901 aa22.27■■□□□ 1.16
TPM1-208ENST00000404484 OR6B3Q8NGW1 331 aa22.27■■□□□ 1.16
TPM1-208ENST00000404484 CDX2Q99626 313 aaPredicted RBP22.27■■□□□ 1.16
TPM1-208ENST00000404484 TMEM161AQ9NX61 479 aa22.27■■□□□ 1.16
TPM1-208ENST00000404484 MIOSQ9NXC5 875 aa22.27■■□□□ 1.16
TPM1-208ENST00000404484 SPTLC1O15269 473 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 IBSPP21815 317 aaPredicted RBP22.26■■□□□ 1.15
TPM1-208ENST00000404484 MEI1Q5TIA1 1274 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 PPP2R2DQ66LE6 453 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 C11orf63Q6NUN7 778 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 DAAM2Q86T65 1068 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 CEP112Q8N8E3 955 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 MNS1Q8NEH6 495 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 ZSWIM1Q9BR11 485 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 NUP85Q9BW27 656 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 MRPL47Q9HD33 250 aaKnown RBP22.26■■□□□ 1.15
TPM1-208ENST00000404484 OSGEPQ9NPF4 335 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 KANSL3Q9P2N6 904 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.26■■□□□ 1.15
TPM1-208ENST00000404484 INPP5FQ9Y2H2 1132 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 SCINQ9Y6U3 715 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 TTC3P53804 2025 aa22.26■■□□□ 1.15
TPM1-208ENST00000404484 A8MXQ7 604 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 O00370 1275 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 POMCP01189 267 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 CFHP08603 1231 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 MMP8P22894 467 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 WARSP23381 471 aaKnown RBP22.25■■□□□ 1.15
TPM1-208ENST00000404484 GTF2F1P35269 517 aaKnown RBP eCLIP22.25■■□□□ 1.15
TPM1-208ENST00000404484 HTRA4P83105 476 aaPredicted RBP22.25■■□□□ 1.15
TPM1-208ENST00000404484 PEX26Q7Z412 305 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 ADGRF2Q8IZF7 708 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 TMEM86AQ8N2M4 240 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 ZNF564Q8TBZ8 553 aaPredicted RBP22.25■■□□□ 1.15
TPM1-208ENST00000404484 RSPH1Q8WYR4 309 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 STRIP2Q9ULQ0 834 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 L1RE1Q9UN81 338 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 INSL6Q9Y581 213 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 ARHGEF37A1IGU5 675 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 CYB561D2O14569 222 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 BUB1BO60566 1050 aaPredicted RBP22.25■■□□□ 1.15
TPM1-208ENST00000404484 FTCDO95954 541 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 GNL1P36915 607 aaPredicted RBP22.25■■□□□ 1.15
TPM1-208ENST00000404484 CLCNKBP51801 687 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 AFF1P51825 1210 aaKnown RBP22.25■■□□□ 1.15
TPM1-208ENST00000404484 TAP1Q03518 808 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 UPP1Q16831 310 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 LCLAT1Q6UWP7 414 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 CRIPAKQ8N1N5 446 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 C1orf131Q8NDD1 294 aaKnown RBP22.25■■□□□ 1.15
TPM1-208ENST00000404484 SPATA18Q8TC71 538 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 TNIP3Q96KP6 325 aa22.25■■□□□ 1.15
TPM1-208ENST00000404484 C11orf70Q9BRQ4 267 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms