RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 GIPC2Q8TF65 315 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 E2F7Q96AV8 911 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 GCNAQ96QF7 691 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 ACBD6Q9BR61 282 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 KIAA1586Q9HCI6 787 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 TRPV5Q9NQA5 729 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 RCOR1Q9UKL0 485 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 PIAS3Q9Y6X2 628 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 HELZP42694 1942 aaKnown RBP16.51■□□□□ 0.23
TPM1-207ENST00000403994 GPR179Q6PRD1 2367 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 PVALEFA0A1B0GWK0 134 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 ZNF263O14978 683 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 SP9P0CG40 484 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 RPS9P46781 194 aaKnown RBP16.5■□□□□ 0.23
TPM1-207ENST00000403994 GPR15P49685 360 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 MYL7Q01449 175 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 CYP24A1Q07973 514 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 MYO1EQ12965 1108 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 NFE2Q16621 373 aaPredicted RBP16.5■□□□□ 0.23
TPM1-207ENST00000403994 SOWAHAQ2M3V2 549 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 HS2ST1Q7LGA3 356 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 LIMS2Q7Z4I7 341 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 ZNF687Q8N1G0 1237 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 STKLD1Q8NE28 680 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 KBTBD7Q8WVZ9 684 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 CLDN23Q96B33 292 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 HPDLQ96IR7 371 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 CGRRF1Q99675 332 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 PI4K2AQ9BTU6 479 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 ABCB6Q9NP58 842 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 SLC39A2Q9NP94 309 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 SPATA6Q9NWH7 488 aaPredicted RBP16.5■□□□□ 0.23
TPM1-207ENST00000403994 MRPS17Q9Y2R5 130 aaKnown RBP16.5■□□□□ 0.23
TPM1-207ENST00000403994 GTF3C3Q9Y5Q9 886 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 R4GN57 208 aa16.5■□□□□ 0.23
TPM1-207ENST00000403994 ANAPC1Q9H1A4 1944 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 GABRDO14764 452 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 CLIC2O15247 247 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 SLFN14P0C7P3 912 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
TPM1-207ENST00000403994 HMGA1P17096 107 aaKnown RBP16.49■□□□□ 0.23
TPM1-207ENST00000403994 PCSK1P29120 753 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 PSMD6Q15008 389 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 TAF12Q16514 161 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 DUOXA2Q1HG44 320 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 ZC3H14Q6PJT7 736 aaKnown RBP16.49■□□□□ 0.23
TPM1-207ENST00000403994 TMEM150AQ86TG1 271 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 GPIHBP1Q8IV16 184 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 CEP57L1Q8IYX8 460 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 CHAMP1Q96JM3 812 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 LRRC3BQ96PB8 259 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 GZF1Q9H116 711 aaPredicted RBP16.49■□□□□ 0.23
TPM1-207ENST00000403994 TASP1Q9H6P5 420 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 NDRG2Q9UN36 371 aaKnown RBP16.49■□□□□ 0.23
TPM1-207ENST00000403994 ZDHHC9Q9Y397 364 aa16.49■□□□□ 0.23
TPM1-207ENST00000403994 MAN2B1O00754 1011 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 CHADO15335 359 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 KLRC4O43908 158 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 PRPF40AO75400 957 aaKnown RBP16.48■□□□□ 0.23
TPM1-207ENST00000403994 PFKFB1P16118 471 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 WEE1P30291 646 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 LHX1P48742 406 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 SNRPFP62306 86 aaKnown RBP16.48■□□□□ 0.23
TPM1-207ENST00000403994 FZD5Q13467 585 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 SDHAF4Q5VUM1 108 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 C12orf56Q8IXR9 622 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 YAF2Q8IY57 180 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 XXYLT1Q8NBI6 393 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 RDH13Q8NBN7 331 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 NELL2Q99435 816 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 PRMT8Q9NR22 394 aaPredicted RBP16.48■□□□□ 0.23
TPM1-207ENST00000403994 OBP2AQ9NY56 170 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 GTF3C4Q9UKN8 822 aa16.48■□□□□ 0.23
TPM1-207ENST00000403994 R3HCC1Q9Y3T6 440 aaKnown RBP16.48■□□□□ 0.23
TPM1-207ENST00000403994 SLC38A8A6NNN8 435 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 DPYSL4O14531 572 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 NCAM2O15394 837 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 LAMTOR5O43504 91 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 TADA3O75528 432 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 CYP2F1P24903 491 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 NLRP12P59046 1061 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 PSMC1P62191 440 aaKnown RBP16.47■□□□□ 0.23
TPM1-207ENST00000403994 KNOP1Q1ED39 458 aaKnown RBP16.47■□□□□ 0.23
TPM1-207ENST00000403994 CFAP221Q4G0U5 840 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 TRAPPC11Q7Z392 1133 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 KIAA0895Q8NCT3 520 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 CCDC127Q96BQ5 260 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 PAGE5Q96GU1 130 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 FUBP3Q96I24 572 aaKnown RBP eCLIP16.47■□□□□ 0.23
TPM1-207ENST00000403994 ZFYVE19Q96K21 471 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 FNBP1Q96RU3 617 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 SYT15Q9BQS2 421 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 SMG9Q9H0W8 520 aaKnown RBP16.47■□□□□ 0.23
TPM1-207ENST00000403994 EXOC1Q9NV70 894 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 CGNQ9P2M7 1197 aaKnown RBP16.47■□□□□ 0.23
TPM1-207ENST00000403994 FBXO4Q9UKT5 387 aa16.47■□□□□ 0.23
TPM1-207ENST00000403994 CACNA1AO00555 2505 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 A0A1B0GVL5 298 aa16.46■□□□□ 0.23
TPM1-207ENST00000403994 CSH1P0DML2 217 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms