RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 MYH10P35580 1976 aa13.67□□□□□ -0.22
VPREB3-202ENST00000398465 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 M0R296 226 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 STX10O60499 249 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 VNN1O95497 513 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
VPREB3-202ENST00000398465 TRIM49P0CI25 452 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 TRIM49CP0CI26 452 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 CEBPBP17676 345 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 CCNE1P24864 410 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 SGSM1Q2NKQ1 1148 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 FAM171BQ6P995 826 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 ING5Q8WYH8 240 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 CEP295NLQ96MC4 621 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 LRRC3Q9BY71 257 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 SNX25Q9H3E2 840 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 TMLHEQ9NVH6 421 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 NUMBLQ9Y6R0 609 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 MIA3Q5JRA6 1907 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 TICRRQ7Z2Z1 1910 aa13.66□□□□□ -0.22
VPREB3-202ENST00000398465 ZDBF2Q9HCK1 2354 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 BICDL2A1A5D9 508 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 CLSTN1O94985 981 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 SRFP11831 508 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 BMP6P22004 513 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 CCR2P41597 374 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 MAGEA11P43364 429 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 MXI1P50539 228 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 PMS1P54277 932 aaKnown RBP13.65□□□□□ -0.22
VPREB3-202ENST00000398465 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
VPREB3-202ENST00000398465 PPP3CAQ08209 521 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 ANKRD40Q6AI12 368 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 VSTM1Q6UX27 236 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 SPATA2LQ8IUW3 424 aaPredicted RBP13.65□□□□□ -0.22
VPREB3-202ENST00000398465 MYLPFQ96A32 169 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 FAXDC2Q96IV6 333 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 MRPL45Q9BRJ2 306 aaKnown RBP13.65□□□□□ -0.22
VPREB3-202ENST00000398465 GPR88Q9GZN0 384 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 SMYD3Q9H7B4 428 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 NXF1Q9UBU9 619 aaKnown RBP13.65□□□□□ -0.22
VPREB3-202ENST00000398465 GTF3C4Q9UKN8 822 aa13.65□□□□□ -0.22
VPREB3-202ENST00000398465 TRIM49BA6NDI0 452 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 HCRTO43612 131 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 MOSPD3O75425 235 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 ECI2O75521 394 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 SOAT2O75908 522 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 HLA-DRAP01903 254 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 MYL4P12829 197 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 CDC25CP30307 473 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 GCLMP48507 274 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 PSMC1P62191 440 aaKnown RBP13.64□□□□□ -0.23
VPREB3-202ENST00000398465 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
VPREB3-202ENST00000398465 KRT39Q6A163 491 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 TTI2Q6NXR4 508 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 DNAJB7Q7Z6W7 309 aaPredicted RBP13.64□□□□□ -0.23
VPREB3-202ENST00000398465 HS6ST3Q8IZP7 471 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 SLC44A3Q8N4M1 653 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 CCDC150Q8NCX0 1101 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 OR6B3Q8NGW1 331 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 MYCBPAPQ8TBZ2 947 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 FAM200AQ8TCP9 573 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 TAS1R2Q8TE23 839 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 FGF14Q92915 247 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 TCEAL4Q96EI5 215 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 TRMT2BQ96GJ1 504 aaKnown RBP13.64□□□□□ -0.23
VPREB3-202ENST00000398465 IPO9Q96P70 1041 aaKnown RBP13.64□□□□□ -0.23
VPREB3-202ENST00000398465 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 SMOC2Q9H3U7 446 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 METTL14Q9HCE5 456 aaKnown RBP13.64□□□□□ -0.23
VPREB3-202ENST00000398465 CRTAC1Q9NQ79 661 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 SLC2A4RGQ9NR83 387 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 ZMYM5Q9UJ78 669 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 NME7Q9Y5B8 376 aa13.64□□□□□ -0.23
VPREB3-202ENST00000398465 MYBPHLA2RUH7 354 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 A8MXQ7 604 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 NOL4O94818 638 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 CSH1P0DML2 217 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 CSH2P0DML3 217 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
VPREB3-202ENST00000398465 FCARP24071 287 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 LMO2P25791 158 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 GNL1P36915 607 aaPredicted RBP13.63□□□□□ -0.23
VPREB3-202ENST00000398465 ASPAP45381 313 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 PAK1Q13153 545 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
VPREB3-202ENST00000398465 PARM1Q6UWI2 310 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 SCARA5Q6ZMJ2 495 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 HFE2Q6ZVN8 426 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 B3GALNT2Q8NCR0 500 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 NELFBQ8WX92 580 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 RSAD2Q8WXG1 361 aa13.63□□□□□ -0.23
VPREB3-202ENST00000398465 ELSPBP1Q96BH3 223 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms