RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 JKAMPQ9P055 326 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 POGKQ9P215 609 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 MAP3K2Q9Y2U5 619 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 USP19O94966 1318 aa3.41□□□□□ -1.86
CD47-203ENST00000398258 ARID4BQ4LE39 1312 aaPredicted RBP3.41□□□□□ -1.86
CD47-203ENST00000398258 ABHD14A-ACY1A0A1B0GW23 586 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 TBX3O15119 743 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 ZFPL1O95159 310 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 SBK3P0C264 359 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 ATP5JP18859 108 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 BMPR1AP36894 532 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 PRIM2P49643 509 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 CLRN1P58418 232 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 FMO1Q01740 532 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 NHLH2Q02577 135 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 ZNF543Q08ER8 600 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 CNGA2Q16280 664 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 ERCC6LQ2NKX8 1250 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 PDCD4Q53EL6 469 aaKnown RBP3.4□□□□□ -1.87
CD47-203ENST00000398258 CCDC157Q569K6 752 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 ATXN7L2Q5T6C5 722 aaPredicted RBP3.4□□□□□ -1.87
CD47-203ENST00000398258 GORABQ5T7V8 394 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 ZNF365Q70YC5 407 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 SRLQ86TD4 932 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 EXOC8Q8IYI6 725 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 OR2C3Q8N628 320 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 RNF152Q8N8N0 203 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 NLGN4YQ8NFZ3 816 aaPredicted RBP3.4□□□□□ -1.87
CD47-203ENST00000398258 BRI3BPQ8WY22 251 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 TNIP3Q96KP6 325 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 ARMT1Q9H993 441 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 KIAA1586Q9HCI6 787 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 SARS2Q9NP81 518 aaKnown RBP3.4□□□□□ -1.87
CD47-203ENST00000398258 STARD7Q9NQZ5 370 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.4□□□□□ -1.87
CD47-203ENST00000398258 FNIP2Q9P278 1114 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 STAP2Q9UGK3 403 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 PAXBP1Q9Y5B6 917 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 PCDHA1Q9Y5I3 950 aa3.4□□□□□ -1.87
CD47-203ENST00000398258 TRIM43BA6NCK2 446 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 SERINC4A6NH21 518 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 RHPN2P1A8MT19 583 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 TRIM38O00635 465 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 HAUS5O94927 633 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 THP07101 528 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 SETSIPP0DME0 302 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 RARBP10826 455 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 ALAS1P13196 640 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 TSHRP16473 764 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 SLC7A1P30825 629 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 CHN2P52757 468 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 HTRA4P83105 476 aaPredicted RBP3.39□□□□□ -1.87
CD47-203ENST00000398258 GUCY1B3Q02153 619 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 CREMQ03060 361 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 BTKQ06187 659 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 UBXN2BQ14CS0 331 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 LONRF1Q17RB8 773 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 KLHL22Q53GT1 634 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 CCDC93Q567U6 631 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 KHDC1LQ5JSQ8 128 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 FAM83BQ5T0W9 1011 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 ZNF529Q6P280 563 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 XRRA1Q6P2D8 792 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 UBE3BQ7Z3V4 1068 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 SESTD1Q86VW0 696 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 CERS3Q8IU89 383 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 CELF5Q8N6W0 485 aaKnown RBP3.39□□□□□ -1.87
CD47-203ENST00000398258 ZFP28Q8NHY6 868 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 PARD3BQ8TEW8 1205 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 MAML1Q92585 1016 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 DDX17Q92841 729 aaKnown RBP3.39□□□□□ -1.87
CD47-203ENST00000398258 SCAMP4Q969E2 229 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 TRIM43Q96BQ3 446 aaPredicted RBP3.39□□□□□ -1.87
CD47-203ENST00000398258 CCDC138Q96M89 665 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 TBCBQ99426 244 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 NEU1Q99519 415 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 ARPC5LQ9BPX5 153 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 SELENOOQ9BVL4 669 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 C1orf43Q9BWL3 253 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 SMURF2Q9HAU4 748 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 PLCB1Q9NQ66 1216 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 STK32BQ9NY57 414 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 CFAP97Q9P2B7 532 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 CLCA2Q9UQC9 943 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 MAST3O60307 1309 aa3.39□□□□□ -1.87
CD47-203ENST00000398258 A0A1W2PPC4 97 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 TCRBV7S2A1N4TA0A589 114 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 GAGE12BA1L429 117 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 GAGE12HA6NDE8 117 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 DRGXA6NNA5 263 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 FGF18O76093 207 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 IL18RAPO95256 599 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 CHEK2O96017 543 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 POMCP01189 267 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 AHSGP02765 367 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 GJB1P08034 283 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 KITP10721 976 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 HDCP19113 662 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 SLC6A2P23975 617 aa3.38□□□□□ -1.87
CD47-203ENST00000398258 MGAT1P26572 445 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms