RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 STYK1Q6J9G0 422 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 SCARA5Q6ZMJ2 495 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ANKS1BQ7Z6G8 1248 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 FAM160B2Q86V87 743 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 SRRM1Q8IYB3 904 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 ARL10Q8N8L6 244 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 GLIS1Q8NBF1 620 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 TTC8Q8TAM2 541 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ARHGEF2Q92974 986 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 ABTB1Q969K4 478 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 PPP2R3CQ969Q6 453 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 GRAMD1AQ96CP6 724 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 AGAP3Q96P47 875 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 PXMP2Q9NR77 195 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 RNF146Q9NTX7 359 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 BRWD3Q6RI45 1802 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 KAT6AQ92794 2004 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 RGPD3A6NKT7 1758 aaPredicted RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 RGPD4Q7Z3J3 1758 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 TMEM120BA0PK00 339 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SIGLEC16A6NMB1 481 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 TTLL13PA6NNM8 815 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 MIF4GDA9UHW6 222 aaKnown RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 POC1B-GALNT4F8VUJ3 575 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 PIK3R2O00459 728 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SPAG7O75391 227 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 CSDE1O75534 798 aaKnown RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 IDO1P14902 403 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 GM2AP17900 193 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 NSFP46459 744 aaKnown RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 RPL7AP62424 266 aaKnown RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 PHEXP78562 749 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 AUHQ13825 339 aaKnown RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 TMEM259Q4ZIN3 620 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SLC44A4Q53GD3 710 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 PCNX4Q63HM2 1172 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 EXOC3L1Q86VI1 746 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 NIM1KQ8IY84 436 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 ST13P4Q8IZP2 240 aaPredicted RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 CYP4X1Q8N118 509 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 LRRC43Q8N309 656 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 MORC4Q8TE76 937 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SREK1Q8WXA9 508 aaKnown RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 SEC14L1Q92503 715 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SHC3Q92529 594 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 FAM81BQ96LP2 452 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 LBHD1Q9BQE6 289 aaPredicted RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 CORO1BQ9BR76 489 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 POLR3FQ9H1D9 316 aaPredicted RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 MYOZ2Q9NPC6 264 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 C1orf112Q9NSG2 853 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 ETNK2Q9NVF9 386 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 KCND2Q9NZV8 630 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 PCDHB4Q9Y5E5 795 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 PCDHA3Q9Y5H8 950 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 PCDHA10Q9Y5I2 948 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 PASKQ96RG2 1323 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 ENTPD5O75356 428 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 LYNP07948 512 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 UBTFL6P0CB48 400 aaPredicted RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 POTEJP0CG39 1038 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 CETPP11597 493 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 CTNNA2P26232 953 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 MLH1P40692 756 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 CCNFP41002 786 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 CDK7P50613 346 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 POLGP54098 1239 aaPredicted RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 NRLP54845 237 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 TAS2R40P59535 323 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SP2Q02086 613 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SLC34A1Q06495 639 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SMTNL2Q2TAL5 461 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 KCNT1Q5JUK3 1230 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 OLFML2BQ68BL8 750 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 LRRC74BQ6ZQY2 392 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SPATA24Q86W54 205 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 MCF2L2Q86YR7 1114 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SLC9A9Q8IVB4 645 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 MAP7D3Q8IWC1 876 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 RSPH1Q8WYR4 309 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SPOCK2Q92563 424 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 SMC6Q96SB8 1091 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 TARS2Q9BW92 718 aaKnown RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 TXLNGYQ9BZA5 131 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 TAOK3Q9H2K8 898 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 DENND2DQ9H6A0 471 aaPredicted RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 SLC38A10Q9HBR0 1119 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 TMEM8AQ9HCN3 771 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 TBC1D22BQ9NU19 505 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 CNOT7Q9UIV1 285 aaKnown RBP5.28□□□□□ -1.56
SSR1-202ENST00000397511 HAO1Q9UJM8 370 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 UBIAD1Q9Y5Z9 338 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 QSER1Q2KHR3 1735 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 COL4A5P29400 1685 aa5.28□□□□□ -1.56
SSR1-202ENST00000397511 A0A0J9YVX5 310 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 PODXLO00592 558 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TLR3O15455 904 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 GRIN3BO60391 1043 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 RGS20O76081 388 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms