RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ADAMTS10Q9H324 1103 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 SNTG2Q9NY99 539 aa17.04■□□□□ 0.32
SNX6-202ENST00000396526 UBQLN1Q9UMX0 589 aaKnown RBP17.04■□□□□ 0.32
SNX6-202ENST00000396526 LRRD1A4D1F6 860 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 CD4P01730 458 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 RARGP13631 454 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 PTPN20Q4JDL3 420 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 KAZNQ674X7 775 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 CCDC25Q86WR0 208 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 ART4Q93070 314 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 F8VP50 259 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 MICAL2O94851 1124 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 NDST1P52848 882 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 SKOR1P84550 965 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 PTK6Q13882 451 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 UAP1Q16222 522 aaPredicted RBP17.03■□□□□ 0.32
SNX6-202ENST00000396526 OLFML2BQ68BL8 750 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 NME8Q8N427 588 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 ELOVL4Q9GZR5 314 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 ZMYND15Q9H091 742 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 ASNSD1Q9NWL6 643 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 GRHL1Q9NZI5 618 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNX6-202ENST00000396526 ZNF148Q9UQR1 794 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 MBLAC1A4D2B0 266 aaPredicted RBP17.03■□□□□ 0.32
SNX6-202ENST00000396526 KPNA6O60684 536 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 INCA1Q0VD86 236 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 LRRC52Q8N7C0 313 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 C7orf31Q8N865 590 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 APBA2Q99767 749 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 TRAIPQ9BWF2 469 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 SDCBP2Q9H190 292 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 ANAPC5Q9UJX4 755 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 SNX9Q9Y5X1 595 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 UTRNP46939 3433 aa17.03■□□□□ 0.32
SNX6-202ENST00000396526 M0QZ92 97 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 GNGT1P63211 74 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 PLCB3Q01970 1234 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 ZNF844Q08AG5 666 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 TFDP3Q5H9I0 405 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 ZDHHC24Q6UX98 284 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 KDM7AQ6ZMT4 941 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 TRMT10CQ7L0Y3 403 aaKnown RBP17.02■□□□□ 0.32
SNX6-202ENST00000396526 TTC13Q8NBP0 860 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 DNAJB3Q8WWF6 145 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 ATG4AQ8WYN0 398 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 PIN4Q9Y237 131 aaKnown RBP17.02■□□□□ 0.32
SNX6-202ENST00000396526 C17orf102A2RUQ5 167 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 RFC1P35251 1148 aaPredicted RBP17.02■□□□□ 0.32
SNX6-202ENST00000396526 CST9Q5W186 159 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 CHADLQ6NUI6 762 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 RGMBQ6NW40 437 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 NCAPGQ9BPX3 1015 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 SPC25Q9HBM1 224 aa17.02■□□□□ 0.32
SNX6-202ENST00000396526 PI4K2BG5E9Z4 385 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 O00370 1275 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 NUDT17P0C025 328 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 ZNF865P0CJ78 1059 aaPredicted RBP17.02■□□□□ 0.31
SNX6-202ENST00000396526 KLF1Q13351 362 aaPredicted RBP17.02■□□□□ 0.31
SNX6-202ENST00000396526 SKIDA1Q1XH10 827 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 PPP1R15BQ5SWA1 713 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 DAB2IPQ5VWQ8 1189 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 SPOCD1Q6ZMY3 1216 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 RASAL3Q86YV0 1011 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 OR2W6PQ8NHA6 318 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 ZNF560Q96MR9 790 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 SLITRK1Q96PX8 696 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 EFR3BQ9Y2G0 817 aa17.02■□□□□ 0.31
SNX6-202ENST00000396526 TCRBV5S1A1TA0A578 114 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 IGF2BP3O00425 579 aaKnown RBP eCLIP17.01■□□□□ 0.311e-6■□□□□ 8.5
SNX6-202ENST00000396526 GPR32O75388 356 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 RPS6KA5O75582 802 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 GSCP56915 257 aaPredicted RBP17.01■□□□□ 0.31
SNX6-202ENST00000396526 LCLAT1Q6UWP7 414 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 SH2D3CQ8N5H7 860 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 APOL6Q9BWW8 343 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 FOXP3Q9BZS1 431 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 H0YGN5 161 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 SETSIPP0DME0 302 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 HOXA11P31270 313 aaPredicted RBP17.01■□□□□ 0.31
SNX6-202ENST00000396526 PNPLA4P41247 253 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 ADCY2Q08462 1091 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 PDCLQ13371 301 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 ORC1Q13415 861 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 C6orf118Q5T5N4 469 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 FAM102AQ5T9C2 384 aaPredicted RBP17.01■□□□□ 0.31
SNX6-202ENST00000396526 OR6B2Q6IFH4 312 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 SNX27Q96L92 541 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 FRMD8P1Q9BZ68 369 aaPredicted RBP17.01■□□□□ 0.31
SNX6-202ENST00000396526 NFS1Q9Y697 457 aa17.01■□□□□ 0.31
SNX6-202ENST00000396526 HPDP32754 393 aaPredicted RBP17■□□□□ 0.31
SNX6-202ENST00000396526 ATP1A2P50993 1020 aa17■□□□□ 0.31
SNX6-202ENST00000396526 SREBF2Q12772 1141 aa17■□□□□ 0.31
SNX6-202ENST00000396526 BYSLQ13895 437 aaKnown RBP17■□□□□ 0.31
SNX6-202ENST00000396526 MFSD7Q6UXD7 560 aa17■□□□□ 0.31
SNX6-202ENST00000396526 RSPH3Q86UC2 560 aa17■□□□□ 0.31
SNX6-202ENST00000396526 UNC93AQ86WB7 457 aa17■□□□□ 0.31
SNX6-202ENST00000396526 KAT2BQ92831 832 aa17■□□□□ 0.31
SNX6-202ENST00000396526 CPXM1Q96SM3 734 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms