RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 AGGF1Q8N302 714 aaeCLIP16.53■□□□□ 0.24
HOXA3-202ENST00000396352 DDX56Q9NY93 547 aaKnown RBP16.53■□□□□ 0.24
HOXA3-202ENST00000396352 ZNRF3Q9ULT6 936 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 MAFBQ9Y5Q3 323 aaPredicted RBP16.53■□□□□ 0.24
HOXA3-202ENST00000396352 IFNB1P01574 187 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 GDF10P55107 478 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 GEMIN4P57678 1058 aaKnown RBP16.53■□□□□ 0.24
HOXA3-202ENST00000396352 PIGHQ14442 188 aaPredicted RBP16.53■□□□□ 0.24
HOXA3-202ENST00000396352 ANKRD20A2Q5SQ80 823 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 ANKRD20A1Q5TYW2 823 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 ANKRD20A3Q5VUR7 823 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 DCUN1D2Q6PH85 259 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 ZNF276Q8N554 614 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 MZB1Q8WU39 189 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 ZNF75CPQ92670 426 aaPredicted RBP16.53■□□□□ 0.24
HOXA3-202ENST00000396352 DHRS4Q9BTZ2 278 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 SAE1Q9UBE0 346 aaPredicted RBP16.53■□□□□ 0.24
HOXA3-202ENST00000396352 ZNF214Q9UL59 606 aaPredicted RBP16.53■□□□□ 0.24
HOXA3-202ENST00000396352 TTLL13PA6NNM8 815 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 ECM2O94769 699 aaPredicted RBP16.53■□□□□ 0.24
HOXA3-202ENST00000396352 FNBP1LQ5T0N5 605 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 CDHR1Q96JP9 859 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 FETUBQ9UGM5 382 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 NUMBLQ9Y6R0 609 aa16.53■□□□□ 0.24
HOXA3-202ENST00000396352 LOC285556D6RIA3 1793 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 FAM189A1O60320 539 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 OATP04181 439 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 GM2AP17900 193 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 TNFSF9P41273 254 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 TFDP1Q14186 410 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 MAPK6Q16659 721 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 CYP4A22Q5TCH4 519 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 HHATQ5VTY9 493 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 TTLL6Q8N841 843 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 CPT1BQ92523 772 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 C10orf88Q9H8K7 445 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 CYP39A1Q9NYL5 469 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 SNCAIPQ9Y6H5 919 aa16.52■□□□□ 0.24
HOXA3-202ENST00000396352 ATP2A1O14983 1001 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 PEX11AO75192 247 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 ZWINTO95229 277 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 EGFRP00533 1210 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 GNAZP19086 355 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 SSTR1P30872 391 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 CDH5P33151 784 aaPredicted RBP16.52■□□□□ 0.23
HOXA3-202ENST00000396352 CTCFP49711 727 aaPredicted RBP16.52■□□□□ 0.23
HOXA3-202ENST00000396352 PLCB3Q01970 1234 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 CXCL9Q07325 125 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 GPAT2Q6NUI2 795 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 FAM13CQ8NE31 585 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 PHACTR1Q9C0D0 580 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 BATF3Q9NR55 127 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 GINM1Q9NU53 330 aa16.52■□□□□ 0.23
HOXA3-202ENST00000396352 ZMYND8Q9ULU4 1186 aaPredicted RBP16.52■□□□□ 0.23
HOXA3-202ENST00000396352 PIAS1O75925 651 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 CBX6O95503 412 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ITGBL1O95965 494 aaPredicted RBP16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ALDH3A1P30838 453 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 SLC25A11Q02978 314 aaKnown RBP16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ZNF394Q53GI3 561 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 PLEKHG4Q58EX7 1191 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ZC3H12AQ5D1E8 599 aaKnown RBP16.51■□□□□ 0.23
HOXA3-202ENST00000396352 SPDYAQ5MJ70 313 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ARFGAP1Q8N6T3 406 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 NAT8LQ8N9F0 302 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 TMEM35BQ8NCS4 154 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 TFAP2BQ92481 460 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 TBC1D10AQ9BXI6 508 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 CISHQ9NSE2 258 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 NDC80O14777 642 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 HARSP12081 509 aaKnown RBP16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ADRA1DP25100 572 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 TAP1Q03518 808 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 RNASELQ05823 741 aaKnown RBP16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ADGRD1Q6QNK2 874 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 POLNQ7Z5Q5 900 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 BRSK2Q8IWQ3 736 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 PPIL6Q8IXY8 311 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 IMPG2Q9BZV3 1241 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 RNPEPL1Q9HAU8 725 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ZNF302Q9NR11 478 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 TRAFD1O14545 582 aaPredicted RBP16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ATG7O95352 703 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 MYL6P60660 151 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 OTUD4Q01804 1114 aaKnown RBP16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ZNF449Q6P9G9 518 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 PCGF5Q86SE9 256 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ACTL9Q8TC94 416 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 ZNF518BQ9C0D4 1074 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 MTMR12Q9C0I1 747 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 CEP83Q9Y592 693 aa16.51■□□□□ 0.23
HOXA3-202ENST00000396352 C2CD2LO14523 706 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 IL1R2P27930 398 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 DYNLT1P63172 113 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 CAPSQ13938 189 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 TMEM132BQ14DG7 1078 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 CTC1Q2NKJ3 1217 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 TAF1BQ53T94 588 aaPredicted RBP16.5■□□□□ 0.23
HOXA3-202ENST00000396352 CCDC125Q86Z20 511 aa16.5■□□□□ 0.23
HOXA3-202ENST00000396352 WDR49Q8IV35 697 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms