RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 OVOS1Q6IE37 1185 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 FUT10Q6P4F1 479 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 NYAP1Q6ZVC0 841 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 PHF13Q86YI8 300 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-206ENST00000395722 RNF168Q8IYW5 571 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-206ENST00000395722 SP7Q8TDD2 431 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-206ENST00000395722 PKMYT1Q99640 499 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 SYT15Q9BQS2 421 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 ACBD6Q9BR61 282 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 GPR62Q9BZJ7 368 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 TSGA10Q9BZW7 698 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 CRTAC1Q9NQ79 661 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 KIAA1671Q9BY89 1806 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 TMCO5BA8MYB1 307 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 TMEM253P0C7T8 217 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 LINC00271P0C7V0 271 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 LAG3P18627 525 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 TKTP29401 623 aaKnown RBP16.04■□□□□ 0.16
PTPN20-206ENST00000395722 SSTR3P32745 418 aaPredicted RBP16.04■□□□□ 0.16
PTPN20-206ENST00000395722 PBX3P40426 434 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 ALDH7A1P49419 539 aaKnown RBP16.04■□□□□ 0.16
PTPN20-206ENST00000395722 KIF5AQ12840 1032 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 MRPL58Q14197 206 aaKnown RBP16.04■□□□□ 0.16
PTPN20-206ENST00000395722 PPP1R26Q5T8A7 1209 aaPredicted RBP16.04■□□□□ 0.16
PTPN20-206ENST00000395722 NAA35Q5VZE5 725 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 KCNT2Q6UVM3 1135 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 PASD1Q8IV76 773 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 HERC6Q8IVU3 1022 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 TMEM35BQ8NCS4 154 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 YME1L1Q96TA2 773 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 LPIN3Q9BQK8 851 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 PDCL3Q9H2J4 239 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 TSPAN16Q9UKR8 245 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 NR2E3Q9Y5X4 410 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 SLC4A7Q9Y6M7 1214 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 NCANO14594 1321 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 NT5C1B-RDH14C9J2C7 533 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 ATP2C2O75185 946 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 ACAT1P24752 427 aaKnown RBP16.04■□□□□ 0.16
PTPN20-206ENST00000395722 TCEAL1Q15170 157 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.04■□□□□ 0.16
PTPN20-206ENST00000395722 MON1BQ7L1V2 547 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 SLC39A11Q8N1S5 342 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 IGSF21Q96ID5 467 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 ZNF558Q96NG5 402 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 HNRNPABQ99729 332 aaKnown RBP16.04■□□□□ 0.16
PTPN20-206ENST00000395722 MTIF3Q9H2K0 278 aaKnown RBP16.04■□□□□ 0.16
PTPN20-206ENST00000395722 LZTFL1Q9NQ48 299 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 FAM49BQ9NUQ9 324 aa16.04■□□□□ 0.16
PTPN20-206ENST00000395722 KRT86O43790 486 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 CAPN15O75808 1086 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 GPD2P43304 727 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 PSMC1P62191 440 aaKnown RBP16.03■□□□□ 0.16
PTPN20-206ENST00000395722 YWHAHQ04917 246 aaPredicted RBP16.03■□□□□ 0.16
PTPN20-206ENST00000395722 PTP4A2Q12974 167 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 GOLGA7BQ2TAP0 167 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 ARHGAP29Q52LW3 1261 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 INTS6LQ5JSJ4 861 aaKnown RBP16.03■□□□□ 0.16
PTPN20-206ENST00000395722 FAM171A1Q5VUB5 890 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 FAM171BQ6P995 826 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 TTC30AQ86WT1 665 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 MCOLN2Q8IZK6 566 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 COLGALT1Q8NBJ5 622 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 C1orf131Q8NDD1 294 aaKnown RBP16.03■□□□□ 0.16
PTPN20-206ENST00000395722 OR10T2Q8NGX3 314 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 CPA5Q8WXQ8 436 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 VCPIP1Q96JH7 1222 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 VN1R3Q9BXE9 311 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 INSL6Q9Y581 213 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 DUSP10Q9Y6W6 482 aa16.03■□□□□ 0.16
PTPN20-206ENST00000395722 A0A0A6YYK5 440 aaPredicted RBP16.02■□□□□ 0.16
PTPN20-206ENST00000395722 SETSIPP0DME0 302 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 CCDC130P13994 396 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 ATP2A2P16615 1042 aaKnown RBP16.02■□□□□ 0.16
PTPN20-206ENST00000395722 MMP8P22894 467 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 NSFP46459 744 aaKnown RBP16.02■□□□□ 0.16
PTPN20-206ENST00000395722 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
PTPN20-206ENST00000395722 CCDC142Q17RM4 750 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 VARS2Q5ST30 1063 aaKnown RBP16.02■□□□□ 0.16
PTPN20-206ENST00000395722 PAQR9Q6ZVX9 377 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 TNS4Q8IZW8 715 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 FUKQ8N0W3 1084 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 THEM5Q8N1Q8 247 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 ANKRD52Q8NB46 1076 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 MYCBPAPQ8TBZ2 947 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 RAD9AQ99638 391 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 CYTH4Q9UIA0 394 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 SALL4Q9UJQ4 1053 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 GTF3C4Q9UKN8 822 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 CEP83Q9Y592 693 aa16.02■□□□□ 0.16
PTPN20-206ENST00000395722 MYBPHLA2RUH7 354 aa16.02■□□□□ 0.15
PTPN20-206ENST00000395722 M0QYV0 167 aa16.02■□□□□ 0.15
PTPN20-206ENST00000395722 MAGEA10P43363 369 aaPredicted RBP16.02■□□□□ 0.15
PTPN20-206ENST00000395722 PLCB3Q01970 1234 aa16.02■□□□□ 0.15
PTPN20-206ENST00000395722 SLC2A14Q8TDB8 520 aa16.02■□□□□ 0.15
PTPN20-206ENST00000395722 CTNNBL1Q8WYA6 563 aaPredicted RBP16.02■□□□□ 0.15
PTPN20-206ENST00000395722 CLP1Q92989 425 aaKnown RBP16.02■□□□□ 0.15
PTPN20-206ENST00000395722 THAP2Q9H0W7 228 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms