RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 DDX47Q9H0S4 455 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 MAP3K20Q9NYL2 800 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 STOX2Q9P2F5 926 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ZNF200P98182 395 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 SGO1Q5FBB7 561 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 EFL1Q7Z2Z2 1120 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 THEM5Q8N1Q8 247 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ZBTB38Q8NAP3 1195 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 CNKSR1Q969H4 720 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 C1QTNF1Q9BXJ1 281 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 LATS2Q9NRM7 1088 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 MYRFQ9Y2G1 1151 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 STX16-NPEPL1H3BU86 382 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 STX16O14662 325 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ULK1O75385 1050 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 OR6B1O95007 311 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 RAB25P57735 213 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 LRRC63Q05C16 580 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 MTFR1Q15390 333 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 SH2D3CQ8N5H7 860 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 PIK3C3Q8NEB9 887 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 SH3TC2Q8TF17 1288 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 FNIP1Q8TF40 1166 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 NACC2Q96BF6 587 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ARPC4-TTLL3A0A0A6YYG9 625 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 THEGLP0DJG4 465 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 TFE3P19532 575 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ACTR2P61160 394 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 RNF25Q96BH1 459 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 S100PBPQ96BU1 408 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 DGCR14Q96DF8 476 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 SLC35C2Q9NQQ7 365 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ABCB10Q9NRK6 738 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 RRN3Q9NYV6 651 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 DUSP12Q9UNI6 340 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 SPEF1Q9Y4P9 236 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 CYP2D7A0A087X1C5 515 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 APOL1O14791 398 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 KCNN4O15554 427 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 PSIP1O75475 530 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ALDH3A2P51648 485 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 HK2P52789 917 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 TNFAIP1Q13829 316 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 RASGRP2Q7LDG7 609 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 SUGP1Q8IWZ8 645 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 PUS7LQ9H0K6 701 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 NOS1APO75052 506 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ZNF682O95780 498 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 APRTP07741 180 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 VIL1P09327 827 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 TIMM50Q3ZCQ8 353 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 CACHD1Q5VU97 1274 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 PACS1Q6VY07 963 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 OR6B3Q8NGW1 331 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 GPKOWQ92917 476 aaPredicted RBP eCLIP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 RMND5AQ9H871 391 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ARHGEF38Q9NXL2 777 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 HBS1LQ9Y450 684 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 NME3Q13232 169 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 DOK7Q18PE1 504 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ZFP69Q49AA0 526 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 HMBOX1Q6NT76 420 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ZNF554Q86TJ5 538 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 LRRC20Q8TCA0 184 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 EEF1AKMT1Q8WVE0 214 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 XAGE2Q96GT9 111 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 SYNDIG1Q9H7V2 258 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 VCPKMTQ9H867 229 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 HAO1Q9UJM8 370 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 FAM50BQ9Y247 325 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 G3V2T6 193 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 ZNF211Q13398 564 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 USP10Q14694 798 aaKnown RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 POLD3Q15054 466 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 UGP2Q16851 508 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 AGBL2Q5U5Z8 902 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 LRIG3Q6UXM1 1119 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 LINS1Q8NG48 757 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 BDH2Q9BUT1 245 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 KATNAL1Q9BW62 490 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 PPCSQ9HAB8 311 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 EFCAB1Q9HAE3 211 aa8.3□□□□□ -1.08
TRPS1-203ENST00000395715 CRNNQ9UBG3 495 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 FBXO9Q9UK97 447 aaPredicted RBP8.3□□□□□ -1.08
TRPS1-203ENST00000395715 NESP48681 1621 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 LOC100506127A0A0U1RQW1 187 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 NDUFS3O75489 264 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 NCAM1P13591 858 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 DCAF15Q66K64 600 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 SYDE1Q6ZW31 735 aaPredicted RBP8.29□□□□□ -1.08
TRPS1-203ENST00000395715 ARHGEF19Q8IW93 802 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 AFG1LQ8WV93 481 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 KCTD4Q8WVF5 259 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 DSCC1Q9BVC3 393 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 GPN3Q9UHW5 284 aaPredicted RBP8.29□□□□□ -1.08
TRPS1-203ENST00000395715 MYO3BQ8WXR4 1341 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 NSD2O96028 1365 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 A0A1W2PQ27 194 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 A0A1W2PQ64 194 aa8.29□□□□□ -1.08
TRPS1-203ENST00000395715 A0A1W2PQD8 194 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms