RNA–Protein interactions for RNA: ENST00000395549.3

ATG13-202, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-202ENST00000395549 VIPR2P41587 438 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 TRPC3Q13507 836 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 SLC44A4Q53GD3 710 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 ARHGAP15Q53QZ3 475 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 VITQ6UXI7 678 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 LIMS2Q7Z4I7 341 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 STKLD1Q8NE28 680 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 SHDQ96IW2 340 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 GCNAQ96QF7 691 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 SYT15Q9BQS2 421 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 FOXQ1Q9C009 403 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 TRPV4Q9HBA0 871 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 FAM86C1Q9NVL1 165 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 NCANO14594 1321 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 CACNA1HO95180 2353 aa17.61■□□□□ 0.41
ATG13-202ENST00000395549 KIF26AQ9ULI4 1882 aaPredicted RBP17.61■□□□□ 0.41
ATG13-202ENST00000395549 ANAPC1Q9H1A4 1944 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 GOLGA6L4A6NEF3 574 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 LRRIQ3A6PVS8 624 aaPredicted RBP17.6■□□□□ 0.41
ATG13-202ENST00000395549 CALUO43852 315 aaPredicted RBP17.6■□□□□ 0.41
ATG13-202ENST00000395549 PHACTR2O75167 634 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 ATP2C2O75185 946 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 WARSP23381 471 aaKnown RBP17.6■□□□□ 0.41
ATG13-202ENST00000395549 CYP2F1P24903 491 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 CDC25CP30307 473 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
ATG13-202ENST00000395549 STARD6P59095 220 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 MYL6P60660 151 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 PSMC1P62191 440 aaKnown RBP17.6■□□□□ 0.41
ATG13-202ENST00000395549 TNNC1P63316 161 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 CYP4F8P98187 520 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 PRKCQQ04759 706 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 BIRC3Q13489 604 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 KCNB1Q14721 858 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 GPR158Q5T848 1215 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 CEP135Q66GS9 1140 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 SPATA2LQ8IUW3 424 aaPredicted RBP17.6■□□□□ 0.41
ATG13-202ENST00000395549 CCDC105Q8IYK2 499 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 PARD3BQ8TEW8 1205 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 DEPDC1BQ8WUY9 529 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 CCDC34Q96HJ3 373 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 PHOX2BQ99453 314 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 MKNK1Q9BUB5 465 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 TRMT61BQ9BVS5 477 aaKnown RBP17.6■□□□□ 0.41
ATG13-202ENST00000395549 IRF2BPLQ9H1B7 796 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 BRD9Q9H8M2 597 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 IL21Q9HBE4 155 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 ABCB6Q9NP58 842 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 CDH9Q9ULB4 789 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 MAPK8IP1Q9UQF2 711 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 PATJQ8NI35 1801 aa17.6■□□□□ 0.41
ATG13-202ENST00000395549 MYBPHLA2RUH7 354 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 HEPACAM2A8MVW5 462 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 CLSTN1O94985 981 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 DCNP07585 359 aaKnown RBP17.59■□□□□ 0.41
ATG13-202ENST00000395549 PDGFRBP09619 1106 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 PSMC3P17980 439 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 LMO2P25791 158 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 GDI1P31150 447 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 DDR2Q16832 855 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 WDR72Q3MJ13 1102 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 SDHAF4Q5VUM1 108 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 TDRD10Q5VZ19 366 aaKnown RBP17.59■□□□□ 0.41
ATG13-202ENST00000395549 TPRG1Q6ZUI0 275 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 GPIHBP1Q8IV16 184 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 FMR1NBQ8N0W7 255 aaPredicted RBP17.59■□□□□ 0.41
ATG13-202ENST00000395549 DTWD2Q8NBA8 298 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 PJA1Q8NG27 643 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 TMEM174Q8WUU8 243 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 ATOH1Q92858 354 aaPredicted RBP17.59■□□□□ 0.41
ATG13-202ENST00000395549 DNASE1L2Q92874 299 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 SYAP1Q96A49 352 aaPredicted RBP17.59■□□□□ 0.41
ATG13-202ENST00000395549 MRPL45Q9BRJ2 306 aaKnown RBP17.59■□□□□ 0.41
ATG13-202ENST00000395549 SNX25Q9H3E2 840 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 MAGED2Q9UNF1 606 aaPredicted RBP17.59■□□□□ 0.41
ATG13-202ENST00000395549 TRAF3IP3Q9Y228 551 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 SIT1Q9Y3P8 196 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 MYH10P35580 1976 aa17.59■□□□□ 0.41
ATG13-202ENST00000395549 KANSL1LA0AUZ9 987 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 STAU1O95793 577 aaKnown RBP17.58■□□□□ 0.4
ATG13-202ENST00000395549 CSH1P0DML2 217 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 CSH2P0DML3 217 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 HMGA1P17096 107 aaKnown RBP17.58■□□□□ 0.4
ATG13-202ENST00000395549 ATICP31939 592 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 AP3M2P53677 418 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 RPL10AP62906 217 aaKnown RBP17.58■□□□□ 0.4
ATG13-202ENST00000395549 DLG4P78352 724 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 PNOCQ13519 176 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 CFAP221Q4G0U5 840 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 FAM171BQ6P995 826 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 C4orf50Q6ZRC1 276 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 ALYREFQ86V81 257 aaKnown RBP17.58■□□□□ 0.4
ATG13-202ENST00000395549 ARID3BQ8IVW6 561 aaPredicted RBP17.58■□□□□ 0.4
ATG13-202ENST00000395549 MFSD6LQ8IWD5 586 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 SCN4BQ8IWT1 228 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 GUF1Q8N442 669 aaKnown RBP17.58■□□□□ 0.4
ATG13-202ENST00000395549 MYLPFQ96A32 169 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 E2F7Q96AV8 911 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 RSPRY1Q96DX4 576 aa17.58■□□□□ 0.4
ATG13-202ENST00000395549 FUBP3Q96I24 572 aaKnown RBP eCLIP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms