RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 POLE2P56282 527 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 ARHGAP1Q07960 439 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 C1QTNF12Q5T7M4 302 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 LONP2Q86WA8 852 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 PDZD8Q8NEN9 1154 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 TRPV1Q8NER1 839 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 EIF3CQ99613 913 aaKnown RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 C1QTNF7Q9BXJ2 289 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 PRKD2Q9BZL6 878 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 TSGA10Q9BZW7 698 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 LRWD1Q9UFC0 647 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 ZNF217O75362 1048 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 LIFRP42702 1097 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 TUBA4AP68366 448 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 YWHAHQ04917 246 aaPredicted RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 PPM1JQ5JR12 505 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 MFN1Q8IWA4 741 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 AP1M1Q9BXS5 423 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 PCDHB2Q9Y5E7 798 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 DNAJC25-GNG10A0A024R161 153 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 NEMP1O14524 444 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 TBX3O15119 743 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 RPL13P26373 211 aaKnown RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 LRPAP1P30533 357 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 CLCN2P51788 898 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 FUT10Q6P4F1 479 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 CENPQQ7L2Z9 268 aaPredicted RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 RELL1Q8IUW5 271 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 OXR1Q8N573 874 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 EZH1Q92800 747 aaPredicted RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 CCDC86Q9H6F5 360 aaKnown RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 RETREG1Q9H6L5 497 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 KIAA1586Q9HCI6 787 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 KCNH7Q9NS40 1196 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 SCINQ9Y6U3 715 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 KIF13BQ9NQT8 1826 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 ZMYM6O95789 1325 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 SYN3O14994 580 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 DFNA5O60443 496 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 NPTXRO95502 500 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 C1RP00736 705 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 DRD1P21728 446 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 COASYQ13057 564 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 CCDC122Q5T0U0 273 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 C6orf118Q5T5N4 469 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 PHLDB3Q6NSJ2 640 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 CAPN12Q6ZSI9 719 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 ST13P4Q8IZP2 240 aaPredicted RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 BBS5Q8N3I7 341 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 MRPL43Q8N983 215 aaKnown RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 CMASQ8NFW8 434 aaPredicted RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 DACT3Q96B18 629 aaPredicted RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 C16orf45Q96MC5 204 aaPredicted RBP8.57□□□□□ -1.04
LIMS1-203ENST00000393310 CSRNP2Q9H175 543 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 GPRC5CQ9NQ84 441 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 MAP10Q9P2G4 905 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 GDAQ9Y2T3 454 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 CAPN7Q9Y6W3 813 aa8.57□□□□□ -1.04
LIMS1-203ENST00000393310 GOLGA8JA6NMD2 632 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 GOLGA8TH3BQL2 631 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 HNRNPDLO14979 420 aaKnown RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 YKT6O15498 198 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 PSMC3P17980 439 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 COX10Q12887 443 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 HSF5Q4G112 596 aaPredicted RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 ALKBH2Q6NS38 261 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 ANGPTL8Q6UXH0 198 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 DRAXINQ8NBI3 349 aaPredicted RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 TRIM58Q8NG06 486 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 SPATA18Q8TC71 538 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 SPPL3Q8TCT6 385 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 TNIP3Q96KP6 325 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 RNF26Q9BY78 433 aaPredicted RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 ZDHHC5Q9C0B5 715 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 PHACTR1Q9C0D0 580 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 JMJD4Q9H9V9 463 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 RGPD2P0DJD1 1756 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 APOA4P06727 396 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 S100A1P23297 94 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 CLCN3P51790 818 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 GPR149Q86SP6 731 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 GALNT6Q8NCL4 622 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 SPDYE1Q8NFV5 336 aaPredicted RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 P2RY13Q9BPV8 354 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 HERC2P3Q9BVR0 1158 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 EPB41L4AQ9HCS5 686 aaPredicted RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 ADAM28Q9UKQ2 775 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 USP20Q9Y2K6 914 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 SGSM2O43147 1006 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 DARSP14868 501 aaKnown RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 SLC7A5Q01650 507 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 USP17L6PQ6QN14 398 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 STOX1Q6ZVD7 989 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 RALGPS2Q86X27 583 aaPredicted RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 CAMKK1Q8N5S9 505 aa8.56□□□□□ -1.04
LIMS1-203ENST00000393310 PRPF31Q8WWY3 499 aaKnown RBP8.56□□□□□ -1.04
LIMS1-203ENST00000393310 COQ7Q99807 217 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms