RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 TRAIPQ9BWF2 469 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 SLC38A7Q9NVC3 462 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 NOD1Q9Y239 953 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 PTPN22Q9Y2R2 807 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 SIGLEC16A6NMB1 481 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 CAND2O75155 1236 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 INHAP05111 366 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 MYBL2P10244 700 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 MRPL10Q7Z7H8 261 aaKnown RBP22.58■■□□□ 1.2
SPHK1-202ENST00000392496 DDX27Q96GQ7 796 aaKnown RBP22.58■■□□□ 1.2
SPHK1-202ENST00000392496 GLT1D1Q96MS3 346 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 MCEEQ96PE7 176 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 CPXM1Q96SM3 734 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 HMX1Q9NP08 348 aaPredicted RBP22.58■■□□□ 1.2
SPHK1-202ENST00000392496 TSPAN16Q9UKR8 245 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 PADI3Q9ULW8 664 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 GIT1Q9Y2X7 761 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 NR2E1Q9Y466 385 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 SQORQ9Y6N5 450 aa22.58■■□□□ 1.2
SPHK1-202ENST00000392496 GRK4P32298 578 aa22.57■■□□□ 1.2
SPHK1-202ENST00000392496 PSMC1P62191 440 aaKnown RBP22.57■■□□□ 1.2
SPHK1-202ENST00000392496 GUCY2DQ02846 1103 aa22.57■■□□□ 1.2
SPHK1-202ENST00000392496 PAK2Q13177 524 aa22.57■■□□□ 1.2
SPHK1-202ENST00000392496 PDCLQ13371 301 aa22.57■■□□□ 1.2
SPHK1-202ENST00000392496 PIGHQ14442 188 aaPredicted RBP22.57■■□□□ 1.2
SPHK1-202ENST00000392496 XYLT1Q86Y38 959 aa22.57■■□□□ 1.2
SPHK1-202ENST00000392496 NIPA2Q8N8Q9 360 aa22.57■■□□□ 1.2
SPHK1-202ENST00000392496 AENQ8WTP8 325 aaKnown RBP22.57■■□□□ 1.2
SPHK1-202ENST00000392496 DNAI2Q9GZS0 605 aa22.57■■□□□ 1.2
SPHK1-202ENST00000392496 GOLGA2P5Q9HBQ8 144 aa22.57■■□□□ 1.2
SPHK1-202ENST00000392496 EPB41L5Q9HCM4 733 aa22.57■■□□□ 1.2
SPHK1-202ENST00000392496 TRMT13Q9NUP7 481 aaKnown RBP22.57■■□□□ 1.2
SPHK1-202ENST00000392496 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.57■■□□□ 1.25e-7■□□□□ 8.8
SPHK1-202ENST00000392496 BHMG1C9JSJ3 638 aaPredicted RBP22.56■■□□□ 1.2
SPHK1-202ENST00000392496 SPTLC1O15269 473 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 ZNF623O75123 536 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 CD52P31358 61 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 RAB27AP51159 221 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 LHX8Q68G74 356 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 OR6B3Q8NGW1 331 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 ZFP42Q96MM3 310 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 MIS12Q9H081 205 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 SYNCQ9H7C4 482 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 MTUS1Q9ULD2 1270 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 NME7Q9Y5B8 376 aa22.56■■□□□ 1.2
SPHK1-202ENST00000392496 PHF2O75151 1096 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 ERBB2P04626 1255 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 FAM163BP0C2L3 166 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 SETSIPP0DME0 302 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 GHRP10912 638 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 TAS2R40P59535 323 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 ZNF252P-AS1Q0IIN9 211 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 DSC3Q14574 896 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 LPIN1Q14693 890 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 ARHGAP17Q68EM7 881 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 DPH6Q7L8W6 267 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 ACOT1Q86TX2 421 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 KATNAL2Q8IYT4 538 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 EIF1ADQ8N9N8 165 aaKnown RBP22.55■■□□□ 1.2
SPHK1-202ENST00000392496 UBA3Q8TBC4 463 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 FNIP1Q8TF40 1166 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 KBTBD7Q8WVZ9 684 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 HINFPQ9BQA5 517 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 AMACRQ9UHK6 382 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 A8MXQ7 604 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 FSCN2O14926 492 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 KRT3P12035 628 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 EPHB4P54760 987 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 LILRA4P59901 499 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 CASP8Q14790 479 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 GOLGA7BQ2TAP0 167 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 PPP1R26Q5T8A7 1209 aaPredicted RBP22.55■■□□□ 1.2
SPHK1-202ENST00000392496 LRRC38Q5VT99 294 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 ADAT2Q7Z6V5 191 aaKnown RBP22.55■■□□□ 1.2
SPHK1-202ENST00000392496 CRYBG2Q8N1P7 616 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 TOP6BLQ8N6T0 577 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 C12orf29Q8N999 325 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 GSTCDQ8NEC7 633 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 APPL2Q8NEU8 664 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 IPO4Q8TEX9 1081 aaKnown RBP22.55■■□□□ 1.2
SPHK1-202ENST00000392496 MAIP1Q8WWC4 291 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 MCRS1Q96EZ8 462 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 TJP2Q9UDY2 1190 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 USTQ9Y2C2 406 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 FRMPD3Q5JV73 1810 aa22.55■■□□□ 1.2
SPHK1-202ENST00000392496 A0A0U1RQG5 324 aaPredicted RBP22.54■■□□□ 1.2
SPHK1-202ENST00000392496 MEIS3P2A8K0S8 358 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 GOLGA8SH3BPF8 625 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 HUS1O60921 280 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 CHRNA3P32297 505 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 MLH1P40692 756 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 OGDHQ02218 1023 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 DHX34Q14147 1143 aaKnown RBP22.54■■□□□ 1.2
SPHK1-202ENST00000392496 CYP1B1Q16678 543 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 PKDCCQ504Y2 493 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 EMBQ6PCB8 327 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 FBXO46Q6PJ61 603 aaPredicted RBP22.54■■□□□ 1.2
SPHK1-202ENST00000392496 GSPT2Q8IYD1 628 aaKnown RBP22.54■■□□□ 1.2
SPHK1-202ENST00000392496 KRT222Q8N1A0 295 aa22.54■■□□□ 1.2
SPHK1-202ENST00000392496 PRELID2Q8N945 189 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms