RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 INCA1Q0VD86 236 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 PLD1Q13393 1074 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 SMAD4Q13485 552 aaKnown RBP7.22□□□□□ -1.25
UBBP1-201ENST00000392399 NCAPHQ15003 741 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 EXOC3L4Q17RC7 722 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 CFAP221Q4G0U5 840 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 SLC39A12Q504Y0 691 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 INTS6LQ5JSJ4 861 aaKnown RBP7.22□□□□□ -1.25
UBBP1-201ENST00000392399 PPM1LQ5SGD2 360 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 ATAT1Q5SQI0 421 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 SPOPLQ6IQ16 392 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 LLGL2Q6P1M3 1020 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 SYCE2Q6PIF2 218 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 LRSAM1Q6UWE0 723 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 RNF19BQ6ZMZ0 732 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 C4orf50Q6ZRC1 276 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 ENOSF1Q7L5Y1 443 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 GPR149Q86SP6 731 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 CRYBG2Q8N1P7 616 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 SMRP1Q8NCR6 262 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 VN1R2Q8NFZ6 395 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 OR10T2Q8NGX3 314 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 LMO3Q8TAP4 145 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 MYCBPAPQ8TBZ2 947 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 CEP295NLQ96MC4 621 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 RIPOR3Q96MK2 946 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 NECTIN4Q96NY8 510 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 NT5C1BQ96P26 610 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 MRPL45Q9BRJ2 306 aaKnown RBP7.22□□□□□ -1.25
UBBP1-201ENST00000392399 PI4K2AQ9BTU6 479 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 PRKD2Q9BZL6 878 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 S1PR5Q9H228 398 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 CYP4F11Q9HBI6 524 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 APOBEC3GQ9HC16 384 aaKnown RBP7.22□□□□□ -1.25
UBBP1-201ENST00000392399 ABCB6Q9NP58 842 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 MAN1C1Q9NR34 630 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 LIMA1Q9UHB6 759 aaKnown RBP7.22□□□□□ -1.25
UBBP1-201ENST00000392399 POLIQ9UNA4 740 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 ASB3Q9Y575 518 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 PCDHB5Q9Y5E4 795 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 VWA8A3KMH1 1905 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 MTMR11A4FU01 709 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 GRXCR2A6NFK2 248 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 H3BQ06 376 aaPredicted RBP7.21□□□□□ -1.26
UBBP1-201ENST00000392399 PRRG1O14668 218 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 MBTPS2O43462 519 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 TBX10O75333 385 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 SLC34A2O95436 690 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 LRG1P02750 347 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 PDGFRBP09619 1106 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 SPATA31D3P0C874 917 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 PTPN1P18031 435 aaKnown RBP7.21□□□□□ -1.26
UBBP1-201ENST00000392399 LMO2P25791 158 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 MAGEA11P43364 429 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 ALDH1A3P47895 512 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 NDST1P52848 882 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 RBM10P98175 930 aaKnown RBP7.21□□□□□ -1.26
UBBP1-201ENST00000392399 DUSP4Q13115 394 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 CUL2Q13617 745 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 IQCB1Q15051 598 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 KRT31Q15323 416 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 FILIP1LQ4L180 1135 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 MIIPQ5JXC2 388 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 FKBP15Q5T1M5 1219 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 VSTM1Q6UX27 236 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 SPATA31D4Q6ZUB0 917 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 LRRTM3Q86VH5 581 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 OSTM1Q86WC4 334 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 DHX40Q8IX18 779 aaKnown RBP7.21□□□□□ -1.26
UBBP1-201ENST00000392399 HS6ST3Q8IZP7 471 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 ELMOD1Q8N336 334 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 AOPEPQ8N6M6 819 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.21□□□□□ -1.26
UBBP1-201ENST00000392399 SLC7A14Q8TBB6 771 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 FAM200AQ8TCP9 573 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 SUSD6Q92537 303 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 TATDN2Q93075 761 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 ZNF512Q96ME7 567 aaPredicted RBP7.21□□□□□ -1.26
UBBP1-201ENST00000392399 TMEM209Q96SK2 561 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 PKMYT1Q99640 499 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 SYT15Q9BQS2 421 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 NT5C1AQ9BXI3 368 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 SMYD3Q9H7B4 428 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 CISHQ9NSE2 258 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 GCNT4Q9P109 453 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 GTF3C4Q9UKN8 822 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 KIAA1257Q9ULG3 409 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 DAAM1Q9Y4D1 1078 aa7.21□□□□□ -1.26
UBBP1-201ENST00000392399 MYBPHLA2RUH7 354 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 GOLGA6L19H0YKK7 550 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 PES1O00541 588 aaKnown RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 LRRN2O75325 713 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 CILPO75339 1184 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 RFPL2O75678 378 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 SEC24AO95486 1093 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 OR4Q2P0C623 313 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 HAPLN1P10915 354 aaPredicted RBP7.2□□□□□ -1.26
UBBP1-201ENST00000392399 PTPN2P17706 415 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 RFX1P22670 979 aa7.2□□□□□ -1.26
UBBP1-201ENST00000392399 ACAT1P24752 427 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms