RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 TIMP1P01033 207 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NGFP01138 241 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CGAP01215 116 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TSHBP01222 138 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PRLP01236 227 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GHRHP01286 108 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GASTP01350 101 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGLV2-23P01705 113 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGHG1P01857 330 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KRT14P02533 472 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FGBP02675 491 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 APOHP02749 345 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 AHSGP02765 367 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 AFPP02771 609 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TFRCP02786 760 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MT-ND5P03915 603 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 VTNP04004 478 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NR3C1P04150 777 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HRGP04196 525 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TUBB4AP04350 444 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TP53P04637 393 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MT1AP04731 61 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ALDH2P05091 517 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CYP11A1P05108 521 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PRKCGP05129 697 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CFIP05156 583 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 EDN1P05305 212 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 JUNP05412 331 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PRKCBP05771 671 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGKV2-30P06310 120 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GSNP06396 782 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GPIP06744 558 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ITGAVP06756 1048 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LPLP06858 475 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 EPHX1P07099 455 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HNRNPCP07910 306 aaKnown RBP eCLIP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RHOP08100 348 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SYPP08247 313 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ADH4P08319 380 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MMEP08473 750 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PDHA1P08559 390 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CYC1P08574 325 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SNRNP70P08621 437 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HCKP08631 526 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 VIMP08670 466 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 F7P08709 466 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IL6RP08887 468 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ADRA2AP08913 450 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HOXC4P09017 264 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 POU2F2P09086 479 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ENO2P09104 434 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GSTM1P09488 218 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CNPP09543 421 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HOXC6P09630 235 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ALPIP09923 528 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LTA4HP09960 611 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM163BP0C2L3 166 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 USP17L7P0C7H9 530 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CLEC2LP0C7M8 214 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RBMY1DP0C7P1 496 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SLFN14P0C7P3 912 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DANCRP0C864 163 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 P0C880 135 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RSPH10BP0C881 870 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PATE4P0C8F1 98 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TLX1NBP0CAT3 122 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZSCAN5DPP0CG00 497 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CHTF8P0CG12 524 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF853P0CG23 659 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF883P0CG24 379 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SP9P0CG40 484 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM157CP0CG43 387 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DUX4L2P0CJ85 424 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DUX4L3P0CJ86 424 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DUX4L5P0CJ88 424 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DUX4L6P0CJ89 424 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DUX4L7P0CJ90 424 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PRSS56P0CW18 603 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RBMY1A1P0DJD3 496 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RBMY1CP0DJD4 496 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LYNX1P0DP58 116 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CSB-PGBD3P0DP91 1061 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HKR1P10072 659 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TXNP10599 105 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PYGMP11217 842 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CHRNB1P11230 501 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PIM1P11309 404 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FGFR1P11362 822 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PSG1P11464 419 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 VDRP11473 427 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FGF3P11487 239 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CYP2A6P11509 494 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PABPC1P11940 636 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CKMT1AP12532 417 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SRCP12931 536 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PEPDP12955 493 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LYL1P12980 280 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 XRCC5P13010 732 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GP1BBP13224 206 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NCAM1P13591 858 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms