RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 KLHL4Q9C0H6 718 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 FAM96AQ9H5X1 160 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 GTSE1Q9NYZ3 720 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 TBX20Q9UMR3 447 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 TCRBV7S2A1N4TA0A589 114 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 TGFB1I1O43294 461 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 ECE2O60344 883 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 PROSCO94903 275 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 OSBPP22059 807 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 ZNF667Q5HYK9 610 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 CMTM5Q96DZ9 223 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 PPCSQ9HAB8 311 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 PCDHA10Q9Y5I2 948 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 PIK3CDO00329 1044 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 PSTPIP1O43586 416 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 MAP3K6O95382 1288 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 IFRD2Q12894 506 aaPredicted RBP14.9□□□□□ -0.02
RTF1-201ENST00000389629 EEPD1Q7L9B9 569 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 TMPRSS6Q8IU80 811 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 PPIL6Q8IXY8 311 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.9□□□□□ -0.02
RTF1-201ENST00000389629 ZHX2Q9Y6X8 837 aa14.9□□□□□ -0.02
RTF1-201ENST00000389629 C5orf60A6NFR6 353 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 TMCC1O94876 653 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 CLEC16AQ2KHT3 1053 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 PIGWQ7Z7B1 504 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 TBC1D23Q9NUY8 699 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 ASNSD1Q9NWL6 643 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 IL1RAPL1Q9NZN1 696 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 SSX2IPQ9Y2D8 614 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 SP100P23497 879 aaPredicted RBP14.89□□□□□ -0.03
RTF1-201ENST00000389629 MCL1Q07820 350 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 SLC45A4Q5BKX6 768 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 KCNT1Q5JUK3 1230 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 EFHC1Q5JVL4 640 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 HHIPL2Q6UWX4 724 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 SPATA18Q8TC71 538 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 EZH1Q92800 747 aaPredicted RBP14.89□□□□□ -0.03
RTF1-201ENST00000389629 OXNAD1Q96HP4 312 aaPredicted RBP14.89□□□□□ -0.03
RTF1-201ENST00000389629 ZNF570Q96NI8 536 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 NDNQ99608 321 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 TAGLN3Q9UI15 199 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 AURKCQ9UQB9 309 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 SPATA31A1Q5TZJ5 1347 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 DISP2A7MBM2 1401 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 M0R2N6 131 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 SMNDC1O75940 238 aaKnown RBP eCLIP14.89□□□□□ -0.03
RTF1-201ENST00000389629 ABCD1P33897 745 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 TCHHL1Q5QJ38 904 aaPredicted RBP14.89□□□□□ -0.03
RTF1-201ENST00000389629 CYP4A22Q5TCH4 519 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 SV2AQ7L0J3 742 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 OTOP1Q7RTM1 612 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 PPP1R16BQ96T49 567 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 FAM192AQ9GZU8 254 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 FBXO6Q9NRD1 293 aaPredicted RBP14.89□□□□□ -0.03
RTF1-201ENST00000389629 FBXO28Q9NVF7 368 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 COG5Q9UP83 839 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 SLC12A4Q9UP95 1085 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 TSC22D4Q9Y3Q8 395 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 ASNSP08243 561 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 SPATA31C1P0DKV0 1188 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 NCOA4Q13772 614 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 FLOT2Q14254 428 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 FAM102AQ5T9C2 384 aaPredicted RBP14.89□□□□□ -0.03
RTF1-201ENST00000389629 RC3H1Q5TC82 1133 aaKnown RBP14.89□□□□□ -0.03
RTF1-201ENST00000389629 TMEM143Q96AN5 459 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 NRBF2Q96F24 287 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 ING2Q9H160 280 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 ZNF212Q9UDV6 495 aa14.89□□□□□ -0.03
RTF1-201ENST00000389629 GOLGA8QA0A0J9YX86 632 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 GOLGA8OA6NCC3 632 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 GOLGA8NF8WBI6 632 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 PAEPP09466 180 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 GTF2H1P32780 548 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 MMP14P50281 582 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 BMPR2Q13873 1038 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 PTK6Q13882 451 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 SLC35G1Q2M3R5 365 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 MCOLN2Q8IZK6 566 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 MAB21L3Q8N8X9 362 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 CDHR1Q96JP9 859 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 AGBL1Q96MI9 1066 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 DENND2DQ9H6A0 471 aaPredicted RBP14.88□□□□□ -0.03
RTF1-201ENST00000389629 SAR1AQ9NR31 198 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 NDUFA13Q9P0J0 144 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 KPNA7A9QM74 516 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 LIN7AO14910 233 aaPredicted RBP14.88□□□□□ -0.03
RTF1-201ENST00000389629 HSPA8P11142 646 aaKnown RBP14.88□□□□□ -0.03
RTF1-201ENST00000389629 ARL4AP40617 200 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 RHBDL3P58872 404 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 LRRC8EQ6NSJ5 796 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 TTC27Q6P3X3 843 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 C1orf186Q6ZWK4 172 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 CATSPER1Q8NEC5 780 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 GDPD5Q8WTR4 605 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 GFM2Q969S9 779 aaKnown RBP14.88□□□□□ -0.03
RTF1-201ENST00000389629 NLRP4Q96MN2 994 aa14.88□□□□□ -0.03
RTF1-201ENST00000389629 ASCC2Q9H1I8 757 aaPredicted RBP14.88□□□□□ -0.03
RTF1-201ENST00000389629 CYP26B1Q9NR63 512 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms