RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 TUBB4AP04350 444 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 MMEP08473 750 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 CSF1P09603 554 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 HNRNPA1P09651 372 aaKnown RBP eCLIP6.17□□□□□ -1.42
ERCC4-202ENST00000389138 SRGAP2CP0DJJ0 459 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 CSH1P0DML2 217 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 CSH2P0DML3 217 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 MAPK3P27361 379 aaPredicted RBP6.17□□□□□ -1.42
ERCC4-202ENST00000389138 SKIV2L2P42285 1042 aaKnown RBP6.17□□□□□ -1.42
ERCC4-202ENST00000389138 AFMP43652 599 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 MAP4K2Q12851 820 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 DAG1Q14118 895 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 LRRC14Q15048 493 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 MCTP1Q6DN14 999 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 TAF2Q6P1X5 1199 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 SLC2A7Q6PXP3 512 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 PRPF39Q86UA1 669 aaKnown RBP6.17□□□□□ -1.42
ERCC4-202ENST00000389138 SESTD1Q86VW0 696 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 LDHDQ86WU2 507 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 SIRT2Q8IXJ6 389 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 RPAP2Q8IXW5 612 aaPredicted RBP6.17□□□□□ -1.42
ERCC4-202ENST00000389138 USHBP1Q8N6Y0 703 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 ADCY4Q8NFM4 1077 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 RAPGEF4Q8WZA2 1011 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 USP6NLQ92738 828 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 PLPPR2Q96GM1 343 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 COG8Q96MW5 612 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 TCHPQ9BT92 498 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 ITPAQ9BY32 194 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 CELF4Q9BZC1 486 aaKnown RBP6.17□□□□□ -1.42
ERCC4-202ENST00000389138 YY1AP1Q9H869 796 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 SH2B1Q9NRF2 756 aaPredicted RBP6.17□□□□□ -1.42
ERCC4-202ENST00000389138 RXFP3Q9NSD7 469 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 AKAP7Q9P0M2 348 aaPredicted RBP6.17□□□□□ -1.42
ERCC4-202ENST00000389138 SAMM50Q9Y512 469 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 NR2E3Q9Y5X4 410 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 TACC3Q9Y6A5 838 aa6.17□□□□□ -1.42
ERCC4-202ENST00000389138 KRT87PA6NCN2 255 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 ZSCAN5CA6NGD5 496 aaPredicted RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 DDX39AO00148 427 aaKnown RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 AQP7O14520 342 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 SASH1O94885 1247 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 SRGAP2BP0DMP2 458 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 IFNAR1P17181 557 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 PAMP19021 973 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 ARNTP27540 789 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 UBE3AQ05086 875 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 COASYQ13057 564 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 SSPNQ14714 243 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 DEFB115Q30KQ5 88 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 TOR2AQ5JU69 321 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 CCDC183Q5T5S1 534 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 TANGO2Q6ICL3 276 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 OVCH1Q7RTY7 1134 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 R3HCC1LQ7Z5L2 792 aaKnown RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 SLFN11Q7Z7L1 901 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 OR1N1Q8NGS0 311 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 ANKS1AQ92625 1134 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 ZNF566Q969W8 418 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 LZTS2Q9BRK4 669 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 CRACR2AQ9BSW2 395 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 RABEP2Q9H5N1 569 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 DDX18Q9NVP1 670 aaKnown RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 IGSF9Q9P2J2 1179 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 DNAJB9Q9UBS3 223 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 CHORDC1Q9UHD1 332 aaPredicted RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 CEP83Q9Y592 693 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 RGSL1A5PLK6 1076 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 LACTBL1A8MY62 500 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 ZBTB42B2RXF5 422 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 SHOXO15266 292 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 RTN2O75298 545 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 FAM155BO75949 473 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 TMEM63AO94886 807 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 PAHP00439 452 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 GHRHP01286 108 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 ZNF853P0CG23 659 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 ESRRAP11474 423 aaPredicted RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 TMEM11P17152 192 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 SLC9A1P19634 815 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 CHMP24386 653 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 HOXA11P31270 313 aaPredicted RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 RFC4P35249 363 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 RAB1AP62820 205 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 CCNA1P78396 465 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 BFSP1Q12934 665 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 RABEP1Q15276 862 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 MTHFSDQ2M296 383 aaKnown RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 ODF2Q5BJF6 829 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 NBPF12Q5TAG4 269 aaPredicted RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 NAA16Q6N069 864 aaPredicted RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 MEX3BQ6ZN04 569 aaKnown RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 TMTC3Q6ZXV5 915 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 TSPYL5Q86VY4 417 aaPredicted RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 NLRP10Q86W26 655 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 LURAP1LQ8IV03 231 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 DCLK2Q8N568 766 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 SRBD1Q8N5C6 995 aaKnown RBP6.16□□□□□ -1.42
ERCC4-202ENST00000389138 PCDH19Q8TAB3 1148 aa6.16□□□□□ -1.42
ERCC4-202ENST00000389138 CEP76Q8TAP6 659 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms