RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 GRIK2Q13002 908 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 PSMD2Q13200 908 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 TBCCQ15814 346 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 CNGA3Q16281 694 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 ZC2HC1BQ5TFG8 222 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 FRMPD2Q68DX3 1309 aaPredicted RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 ZNF774Q6NX45 483 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 ABHD17CQ6PCB6 329 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 H1FNTQ75WM6 255 aaPredicted RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 WDR53Q7Z5U6 358 aaPredicted RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 LINC00612Q8N6U2 182 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 IL17RCQ8NAC3 791 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 ENGASEQ8NFI3 743 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 SEC16BQ96JE7 1060 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 PKP4Q99569 1192 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 SLC25A33Q9BSK2 321 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 DDX31Q9H8H2 851 aaKnown RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 DLL3Q9NYJ7 618 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 PLEKHB1Q9UF11 243 aaPredicted RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 SIK3Q9Y2K2 1263 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 B3GALT1Q9Y5Z6 326 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 RNF215Q9Y6U7 377 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 TTBK1Q5TCY1 1321 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 SOWAHDA6NJG2 315 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 IFNL4K9M1U5 179 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 DLX3O60479 287 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 EXOC3O60645 756 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 EFCAB14O75071 495 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 HIP1RO75146 1068 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 FOXH1O75593 365 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 AMBPP02760 352 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 KCNA2P16389 499 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 ALDH4A1P30038 563 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 ECHS1P30084 290 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 IARSP41252 1262 aaKnown RBP-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 GRIA2P42262 883 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 PCYT1AP49585 367 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 SLC8A3P57103 927 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 NOMO3P69849 1222 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 LACTBP83111 547 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 B4GALNT1Q00973 533 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 KCNJ12Q14500 433 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 NOMO1Q15155 1222 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 SLC9C1Q4G0N8 1177 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 NOMO2Q5JPE7 1267 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 PRAMEF14Q5SWL7 426 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 RBM20Q5T481 1227 aaKnown RBP-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 STYK1Q6J9G0 422 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 CREB3L2Q70SY1 520 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 TRMT1LQ7Z2T5 733 aaKnown RBP-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 ADGRG5Q8IZF4 528 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 NUP133Q8WUM0 1156 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 SLC46A1Q96NT5 459 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 IER2Q9BTL4 223 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 TPSD1Q9BZJ3 242 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 WDR13Q9H1Z4 485 aa-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 GNEQ9Y223 722 aaKnown RBP-0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 MUC6Q6W4X9 2439 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 CCDC66A2RUB6 948 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 WEE2P0C1S8 567 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 SRGAP2CP0DJJ0 459 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ENGP17813 658 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 DNM2P50570 870 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 PPP3CAQ08209 521 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 CRYZQ08257 329 aaKnown RBP-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ADCY2Q08462 1091 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 RIGQ13278 110 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 TMEM30BQ3MIR4 351 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 PITRM1Q5JRX3 1037 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 KIRREL2Q6UWL6 708 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 FAM83HQ6ZRV2 1179 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 TXNDC2Q86VQ3 553 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 KIF18BQ86Y91 864 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 SH3TC2Q8TF17 1288 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ZNF721Q8TF20 911 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ATRIPQ8WXE1 791 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 RUNDC1Q96C34 613 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 IGSF21Q96ID5 467 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ASB16Q96NS5 453 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 CDK19Q9BWU1 502 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 DUSP22Q9NRW4 184 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 PODXL2Q9NZ53 605 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 GPRC5DQ9NZD1 345 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 G3BP2Q9UN86 482 aaKnown RBP-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 COG5Q9UP83 839 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 LIMCH1Q9UPQ0 1083 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 DTX4Q9Y2E6 619 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 NEU2Q9Y3R4 380 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 INSL5Q9Y5Q6 135 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 FNDC1Q4ZHG4 1894 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 STAB1Q9NY15 2570 aa-0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 IGLV3-10A0A075B6K4 115 aa-0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 TCP11X1B4DZS4 312 aa-0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 TOR1BO14657 336 aa-0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 GASTP01350 101 aa-0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 CD48P09326 243 aa-0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 NPSP0C0P6 89 aa-0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 PTPN7P35236 360 aa-0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 CDKN1AP38936 164 aa-0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 CPA2P48052 419 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms