RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 POLNQ7Z5Q5 900 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 C4orf33Q8N1A6 199 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 PRPF31Q8WWY3 499 aaKnown RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 PRCCQ92733 491 aaPredicted RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 MRRFQ96E11 262 aaKnown RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 RAB3IPQ96QF0 476 aaPredicted RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 FRMD8P1Q9BZ68 369 aaPredicted RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 USH1CQ9Y6N9 552 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 WEE2P0C1S8 567 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 CCND1P24385 295 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 PSMA2P25787 234 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 GBP2P32456 591 aaPredicted RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 CDH5P33151 784 aaPredicted RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 RPA3P35244 121 aaPredicted RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 MSH2P43246 934 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 TARBP2Q15633 366 aaKnown RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 PDK4Q16654 411 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 WDTC1Q8N5D0 677 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 TTC13Q8NBP0 860 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 SLC35B2Q8TB61 432 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 AGAP11Q8TF27 550 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 N4BP2L2Q92802 583 aaPredicted RBP17.18■□□□□ 0.34
VPS16-203ENST00000380469 KIF9Q9HAQ2 790 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 PIM2Q9P1W9 311 aa17.18■□□□□ 0.34
VPS16-203ENST00000380469 GOLGA8SH3BPF8 625 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 GOLGA8MH3BSY2 632 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 OGTO15294 1046 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 MAFO75444 373 aaPredicted RBP17.17■□□□□ 0.34
VPS16-203ENST00000380469 UNC5CO95185 931 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 KRT7P08729 469 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 STAT5BP51692 787 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 ARL4CP56559 192 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 GEMIN4P57678 1058 aaKnown RBP17.17■□□□□ 0.34
VPS16-203ENST00000380469 YWHAEP62258 255 aaKnown RBP17.17■□□□□ 0.34
VPS16-203ENST00000380469 ATP11AP98196 1134 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 HADHQ16836 314 aaKnown RBP17.17■□□□□ 0.34
VPS16-203ENST00000380469 VSIG1Q86XK7 387 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 ANKMY2Q8IV38 441 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 PPIL6Q8IXY8 311 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 PYROXD1Q8WU10 500 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 TRIM33Q9UPN9 1127 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 EFR3BQ9Y2G0 817 aa17.17■□□□□ 0.34
VPS16-203ENST00000380469 TTLL13PA6NNM8 815 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 GMPSP49915 693 aaPredicted RBP17.16■□□□□ 0.34
VPS16-203ENST00000380469 DYNLT1P63172 113 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 TFAMQ00059 246 aaKnown RBP17.16■□□□□ 0.34
VPS16-203ENST00000380469 CNTN2Q02246 1040 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 ZNF699Q32M78 642 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 CHST13Q8NET6 341 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 TFAP2BQ92481 460 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 STAMBPL1Q96FJ0 436 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 CAMKK2Q96RR4 588 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 ACO2Q99798 780 aaKnown RBP17.16■□□□□ 0.34
VPS16-203ENST00000380469 ZWILCHQ9H900 591 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 EBF2Q9HAK2 575 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 ETNK1Q9HBU6 452 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 FAM189A1O60320 539 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 MSCO60682 206 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 DCTN3O75935 186 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 ANP32DO95626 131 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 KRT3P12035 628 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 CTCFP49711 727 aaPredicted RBP17.16■□□□□ 0.34
VPS16-203ENST00000380469 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
VPS16-203ENST00000380469 FSTL1Q12841 308 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 SCARA5Q6ZMJ2 495 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 RSAD2Q8WXG1 361 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 THOC1Q96FV9 657 aaKnown RBP17.16■□□□□ 0.34
VPS16-203ENST00000380469 LRRC37BQ96QE4 947 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 PCYT2Q99447 389 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 MYLK2Q9H1R3 596 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 NOP53Q9NZM5 478 aaKnown RBP17.16■□□□□ 0.34
VPS16-203ENST00000380469 L3MBTL1Q9Y468 752 aa17.16■□□□□ 0.34
VPS16-203ENST00000380469 FARP1Q9Y4F1 1045 aaPredicted RBP17.16■□□□□ 0.34
VPS16-203ENST00000380469 SIGLEC16A6NMB1 481 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 SPDYE16A6NNV3 312 aaPredicted RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 MED7O43513 233 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 ZWINTO95229 277 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 SRGAP2CP0DJJ0 459 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 UBA1P22314 1058 aaKnown RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 RFC1P35251 1148 aaPredicted RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 OTUD4Q01804 1114 aaKnown RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 SEPT7Q16181 437 aaKnown RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 EFHC2Q5JST6 749 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 IER5Q5VY09 327 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 ZBTB8OSQ8IWT0 167 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 ATP11CQ8NB49 1132 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 ACTL9Q8TC94 416 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 RSRC1Q96IZ7 334 aaKnown RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 PHACTR1Q9C0D0 580 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 FETUBQ9UGM5 382 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 A0A1W2PPM1 405 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 C3orf70A6NLC5 250 aaPredicted RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 TYROBPO43914 113 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 CST8O60676 142 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 EDF1O60869 148 aaKnown RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 FARP2O94887 1054 aaPredicted RBP17.15■□□□□ 0.34
VPS16-203ENST00000380469 TNNC2P02585 160 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 CD19P15391 556 aa17.15■□□□□ 0.34
VPS16-203ENST00000380469 MAPK6Q16659 721 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms