RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 THSD7BQ9C0I4 1608 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 SIGLEC16A6NMB1 481 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 F8VP50 259 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 ERBB2P04626 1255 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 CHRNA3P32297 505 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 PTGISQ16647 500 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 ACOT1Q86TX2 421 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 RPAINQ86UA6 219 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 SYNCQ9H7C4 482 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 TSPAN16Q9UKR8 245 aa20.99■□□□□ 0.95
PDLIM5-205ENST00000380180 KPNA7A9QM74 516 aa20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 KRT3P12035 628 aa20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 RFC1P35251 1148 aaPredicted RBP20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 MGAT3Q09327 533 aa20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 PDCLQ13371 301 aa20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 CUL1Q13616 776 aa20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 PIGHQ14442 188 aaPredicted RBP20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 XYLT1Q86Y38 959 aa20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 PCSK9Q8NBP7 692 aaKnown RBP20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 TRIM51Q9BSJ1 452 aa20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 LCMT1Q9UIC8 334 aa20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 UTP11Q9Y3A2 253 aaKnown RBP20.98■□□□□ 0.95
PDLIM5-205ENST00000380180 SPTLC1O15269 473 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 TCF4P15884 667 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 HOXD10P28358 340 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 THPOP40225 353 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 GABRB2P47870 512 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 GPS2Q13227 327 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 DHX34Q14147 1143 aaKnown RBP20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 ZNF268Q14587 947 aaPredicted RBP20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 CYP1B1Q16678 543 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 PPP1R26Q5T8A7 1209 aaPredicted RBP20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 MAP3K21Q5TCX8 1036 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 TTC27Q6P3X3 843 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 KATNAL2Q8IYT4 538 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 EIF1ADQ8N9N8 165 aaKnown RBP20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 OR6B3Q8NGW1 331 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 SEC14L1Q92503 715 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 ZFP42Q96MM3 310 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 CFHR5Q9BXR6 569 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 OSBPL7Q9BZF2 842 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 CHST12Q9NRB3 414 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 CREBZFQ9NS37 354 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 FAM105AQ9NUU6 356 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 WDR35Q9P2L0 1181 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 PCYOX1Q9UHG3 505 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 HTTP42858 3142 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 MEIS3P2A8K0S8 358 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 H3BQF6 201 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 PTGESO14684 152 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 DAPK3O43293 454 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 ECHS1P30084 290 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 GJC1P36383 396 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 GSCP56915 257 aaPredicted RBP20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 HLTFQ14527 1009 aaKnown RBP eCLIP20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 CCDC137Q6PK04 289 aaKnown RBP20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 JOSD2Q8TAC2 188 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 ZNF560Q96MR9 790 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 HERPUD2Q9BSE4 406 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 ACBD3Q9H3P7 528 aa20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 AGO3Q9H9G7 860 aaKnown RBP20.97■□□□□ 0.95
PDLIM5-205ENST00000380180 PFKMP08237 780 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 OAS2P29728 719 aaKnown RBP20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 PNPLA4P41247 253 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 PTGIRP43119 386 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 TAF6P49848 677 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 NNTQ13423 1086 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 STILQ15468 1287 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 ATP13A4Q4VNC1 1196 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 UNC93AQ86WB7 457 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 CCDC50Q8IVM0 306 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 NIPA2Q8N8Q9 360 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.96■□□□□ 0.958e-7■■■■■ 60.7
PDLIM5-205ENST00000380180 RAB17Q9H0T7 212 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 GDAP2Q9NXN4 497 aa20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 DDX20Q9UHI6 824 aaKnown RBP20.96■□□□□ 0.95
PDLIM5-205ENST00000380180 FAM187AA6NFU0 413 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 RPLP2P05387 115 aaKnown RBP20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 GOLGA7BQ2TAP0 167 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 JAMLQ86YT9 394 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 EXD1Q8NHP7 514 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 PPP1R10Q96QC0 940 aaKnown RBP20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 DPH5Q9H2P9 285 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 FAM49BQ9NUQ9 324 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 A8MXQ7 604 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 GPR182O15218 404 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 COILP38432 576 aaPredicted RBP20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 ITGA7Q13683 1181 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 C12orf50Q8NA57 414 aaPredicted RBP20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 TSEN2Q8NCE0 465 aaKnown RBP20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 RAET1EQ8TD07 263 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 KBTBD7Q8WVZ9 684 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 MCRS1Q96EZ8 462 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 LPIN3Q9BQK8 851 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 ERP44Q9BS26 406 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 TRIM31Q9BZY9 425 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 NEUROG2Q9H2A3 272 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 DPEP3Q9H4B8 488 aa20.95■□□□□ 0.94
PDLIM5-205ENST00000380180 LRRC19Q9H756 370 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms