RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 IRF7Q92985 503 aa25.55■■□□□ 1.68
CDKN2A-203ENST00000380151 GCNAQ96QF7 691 aa25.55■■□□□ 1.68
CDKN2A-203ENST00000380151 PKMYT1Q99640 499 aa25.55■■□□□ 1.68
CDKN2A-203ENST00000380151 HPSEQ9Y251 543 aa25.55■■□□□ 1.68
CDKN2A-203ENST00000380151 COL4A2P08572 1712 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 TNNI1P19237 187 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 CDC25CP30307 473 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 STK4Q13043 487 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 KMT5BQ4FZB7 885 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 SDHAF4Q5VUM1 108 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 MFSD6LQ8IWD5 586 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 SPATA18Q8TC71 538 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 BCO2Q9BYV7 579 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 GTF3C4Q9UKN8 822 aa25.54■■□□□ 1.68
CDKN2A-203ENST00000380151 SHISA7A6NL88 538 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 GABRDO14764 452 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 ZNF263O14978 683 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 PCSK1P29120 753 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 LHX1P48742 406 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 ZNF852Q6ZMS4 543 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 ASCL5Q7RTU5 278 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 C12orf56Q8IXR9 622 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 YAF2Q8IY57 180 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 KBTBD7Q8WVZ9 684 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 E2F7Q96AV8 911 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 OSBPL6Q9BZF3 934 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 GZF1Q9H116 711 aaPredicted RBP25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 CGNQ9P2M7 1197 aaKnown RBP25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 USP25Q9UHP3 1055 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 VPS13AQ96RL7 3174 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 DMDP11532 3685 aa25.53■■□□□ 1.68
CDKN2A-203ENST00000380151 EXOC3O60645 756 aa25.52■■□□□ 1.68
CDKN2A-203ENST00000380151 PRAMEF12O95522 483 aa25.52■■□□□ 1.68
CDKN2A-203ENST00000380151 CYP2F1P24903 491 aa25.52■■□□□ 1.68
CDKN2A-203ENST00000380151 PSMC1P62191 440 aaKnown RBP25.52■■□□□ 1.68
CDKN2A-203ENST00000380151 LIMS2Q7Z4I7 341 aa25.52■■□□□ 1.68
CDKN2A-203ENST00000380151 C1orf210Q8IVY1 113 aa25.52■■□□□ 1.68
CDKN2A-203ENST00000380151 TASP1Q9H6P5 420 aa25.52■■□□□ 1.68
CDKN2A-203ENST00000380151 ABCB6Q9NP58 842 aa25.52■■□□□ 1.68
CDKN2A-203ENST00000380151 TICRRQ7Z2Z1 1910 aa25.52■■□□□ 1.68
CDKN2A-203ENST00000380151 MYBPHLA2RUH7 354 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 ARNTLO00327 626 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 ATP2C2O75185 946 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 HMGA1P17096 107 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 SYKP43405 635 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 NDUFA8P51970 172 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 DDR2Q16832 855 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 DPH6Q7L8W6 267 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 GOLGA5Q8TBA6 731 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 LRRC3BQ96PB8 259 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 MMS19Q96T76 1030 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 SYT15Q9BQS2 421 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 TRPV5Q9NQA5 729 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 SPATA6Q9NWH7 488 aaPredicted RBP25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 MAGED2Q9UNF1 606 aaPredicted RBP25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 MRPS17Q9Y2R5 130 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 ATP6V1DQ9Y5K8 247 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 PIAS3Q9Y6X2 628 aa25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 ZFHX2Q9C0A1 2572 aaPredicted RBP25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 NUP210Q8TEM1 1887 aaPredicted RBP25.51■■□□□ 1.67
CDKN2A-203ENST00000380151 PRR23AA6NEV1 266 aa25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 DPYSL4O14531 572 aa25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 CST3P01034 146 aaPredicted RBP25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 LMO2P25791 158 aa25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 CASP4P49662 377 aa25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 FCHO2Q0JRZ9 810 aa25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 TMEM150AQ86TG1 271 aa25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 SPATA2LQ8IUW3 424 aaPredicted RBP25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 PLEKHO2Q8TD55 490 aa25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 NKD2Q969F2 451 aaPredicted RBP25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 SMG9Q9H0W8 520 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 NDRG2Q9UN36 371 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-203ENST00000380151 PRR29P0C7W0 189 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 CSH1P0DML2 217 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 CSH2P0DML3 217 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 WARSP23381 471 aaKnown RBP25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 NLRP12P59046 1061 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 RPL10AP62906 217 aaKnown RBP25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 FSIP1Q8NA03 581 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 ZNF516Q92618 1163 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 MYLPFQ96A32 169 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 SLC46A2Q9BY10 475 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 SCAND2PQ9GZW5 306 aaPredicted RBP25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 GDPD2Q9HCC8 539 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 CDH9Q9ULB4 789 aa25.49■■□□□ 1.67
CDKN2A-203ENST00000380151 F5P12259 2224 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 FAM237AA0A1B0GTK4 181 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 MAN2B1O00754 1011 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 CHADO15335 359 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 F11P03951 625 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 RPN1P04843 607 aaKnown RBP25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 MYL1P05976 194 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 PSMD2Q13200 908 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 CFAP221Q4G0U5 840 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 SCN4BQ8IWT1 228 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 MAML2Q8IZL2 1156 aaPredicted RBP25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 CSGALNACT1Q8TDX6 532 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 CLDN23Q96B33 292 aa25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 FUBP3Q96I24 572 aaKnown RBP eCLIP25.48■■□□□ 1.67
CDKN2A-203ENST00000380151 ZFYVE19Q96K21 471 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms