RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 OR2W6PQ8NHA6 318 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 RUBCNQ92622 972 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 THOC1Q96FV9 657 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 SPON2Q9BUD6 331 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 TIMM13Q9Y5L4 95 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 NRCAMQ92823 1304 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 CCDC160A6NGH7 325 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 APOEP02649 317 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 SEC24CP53992 1094 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 MAPK7Q13164 816 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 MAP7D1Q3KQU3 841 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 IRF2BP2Q7Z5L9 587 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 CCDC197Q8NCU1 140 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 SLC7A14Q8TBB6 771 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 SHC3Q92529 594 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 ISCUQ9H1K1 167 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 ITGA11Q9UKX5 1188 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 TNFSF13BQ9Y275 285 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 SRCAPQ6ZRS2 3230 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 AP1G2O75843 785 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 RECQL4O94761 1208 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 LSM8O95777 96 aaKnown RBP14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 KCNA3P22001 575 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 THOC5Q13769 683 aaKnown RBP14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 CCDC38Q502W7 563 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 NUGGCQ68CJ6 796 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 SYDE1Q6ZW31 735 aaPredicted RBP14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 ANKMY2Q8IV38 441 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 ARRDC4Q8NCT1 418 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 HASPINQ8TF76 798 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 MCUR1Q96AQ8 359 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 ATP6V1G3Q96LB4 118 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 ACO2Q99798 780 aaKnown RBP14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 ADAM33Q9BZ11 813 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 STARD7Q9NQZ5 370 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 TLK1Q9UKI8 766 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 BARX2Q9UMQ3 279 aaPredicted RBP14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 IQANK1A0A1B0GTG1 560 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 MAP3K6O95382 1288 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 BRAFP15056 766 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 ATN1P54259 1190 aaPredicted RBP14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 COG7P83436 770 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 TDRD10Q5VZ19 366 aaKnown RBP14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 TBC1D1Q86TI0 1168 aaPredicted RBP14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 DEPDC1BQ8WUY9 529 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 TRIM62Q9BVG3 475 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 PLEKHA5Q9HAU0 1116 aa14.88□□□□□ -0.03
SHROOM1-203ENST00000378679 CASTOR2A6NHX0 329 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 NCAM1P13591 858 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 ADGRF2Q8IZF7 708 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 AFAP1L2Q8N4X5 818 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 ATP11CQ8NB49 1132 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 GSDMBQ8TAX9 411 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 ACTRT1Q8TDG2 376 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 HNRNPLLQ8WVV9 542 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 VIPAS39Q9H9C1 493 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 KCND1Q9NSA2 647 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 BFARQ9NZS9 450 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 GGT7Q9UJ14 662 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 OPLAHO14841 1288 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 KYNUQ16719 465 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 DUSP28Q4G0W2 176 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 BEND6Q5SZJ8 279 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 SPRYD7Q5W111 196 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 C12orf56Q8IXR9 622 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 AGAP3Q96P47 875 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 LBHD1Q9BQE6 289 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 RNPEPQ9H4A4 650 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 ABI2Q9NYB9 513 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 TSPAN16Q9UKR8 245 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 REXO2Q9Y3B8 237 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 IRS2Q9Y4H2 1338 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 POMCP01189 267 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 ICAM3P32942 547 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 WDR93Q6P2C0 686 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 FAM71AQ8IYT1 594 aa14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 DHX33Q9H6R0 707 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-203ENST00000378679 EPHB1P54762 984 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 PACS2Q86VP3 889 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 RXFP2Q8WXD0 754 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 XPNPEP1Q9NQW7 623 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 NEU2Q9Y3R4 380 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 A0A0B4J269 797 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 GJB6O95452 261 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 NFICP08651 508 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 SKIP12755 728 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 ACAT1P24752 427 aaKnown RBP14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 SERPINB6P35237 376 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 SESN2P58004 480 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 MGAT5BQ3V5L5 792 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 NT5DC3Q86UY8 548 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 DAW1Q8N136 415 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 CASKIN2Q8WXE0 1202 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 NMRK2Q9NPI5 230 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 DDIT4Q9NX09 232 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 HPCAL4Q9UM19 191 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 L1RE1Q9UN81 338 aa14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 PPP1R12AO14974 1030 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-203ENST00000378679 PFDN6O15212 129 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms