RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PDIA2Q13087 525 aaKnown RBP19.14■□□□□ 0.65
TDP2-202ENST00000378198 E2F5Q15329 346 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 CDCA2Q69YH5 1023 aaPredicted RBP19.14■□□□□ 0.65
TDP2-202ENST00000378198 ASRGL1Q7L266 308 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 APOBEC3FQ8IUX4 373 aaKnown RBP19.14■□□□□ 0.65
TDP2-202ENST00000378198 ZBTB8OSQ8IWT0 167 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 SEPT1Q8WYJ6 367 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 TFAP2BQ92481 460 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 HAUS1Q96CS2 278 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 KLRG1Q96E93 195 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 FAM167AQ96KS9 214 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 PNMA3Q9UL41 463 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 FZD1Q9UP38 647 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 C3orf70A6NLC5 250 aaPredicted RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 SIGLEC16A6NMB1 481 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 PRKCBP05771 671 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 KRT7P08729 469 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 WEE2P0C1S8 567 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 PSMA2P25787 234 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 HADHQ16836 314 aaKnown RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 ZNF699Q32M78 642 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 CYP4A22Q5TCH4 519 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 ECHDC2Q86YB7 292 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 GIMAP7Q8NHV1 300 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 ACSF2Q96CM8 615 aaPredicted RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 LHX5Q9H2C1 402 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 GEMIN8Q9NWZ8 242 aaKnown RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 PSMC3IPQ9P2W1 217 aaPredicted RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 FETUBQ9UGM5 382 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 AGTPBP1Q9UPW5 1226 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 FARP1Q9Y4F1 1045 aaPredicted RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 AFG3L2Q9Y4W6 797 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 GJA3Q9Y6H8 435 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 NFKBIEO00221 500 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 MED7O43513 233 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 GAS2O43903 313 aaKnown RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 IFNB1P01574 187 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 CCNB1P14635 433 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 PHBP35232 272 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 MXD4Q14582 209 aaPredicted RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 PDK4Q16654 411 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 MAPK6Q16659 721 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 HIF1AQ16665 826 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 EFHC2Q5JST6 749 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 HP1BP3Q5SSJ5 553 aaPredicted RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 PRAMEF18Q5VWM3 479 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 PPIL6Q8IXY8 311 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 FBF1Q8TES7 1133 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 FNIP1Q8TF40 1166 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 SSU72Q9NP77 194 aaKnown RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 PHTF1Q9UMS5 762 aa19.13■□□□□ 0.65
TDP2-202ENST00000378198 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.13■□□□□ 0.65
TDP2-202ENST00000378198 TNNC2P02585 160 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 KRT3P12035 628 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 TCF7P36402 384 aaPredicted RBP19.12■□□□□ 0.65
TDP2-202ENST00000378198 ASPAP45381 313 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 GEMIN4P57678 1058 aaKnown RBP19.12■□□□□ 0.65
TDP2-202ENST00000378198 LACTBP83111 547 aaPredicted RBP19.12■□□□□ 0.65
TDP2-202ENST00000378198 PDE4CQ08493 712 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 SH3D19Q5HYK7 790 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 NOL9Q5SY16 702 aaKnown RBP19.12■□□□□ 0.65
TDP2-202ENST00000378198 FAM47EQ6ZV65 393 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 EXOC8Q8IYI6 725 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 THNSL1Q8IYQ7 743 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 C2orf40Q9H1Z8 148 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 ABLIM1O14639 778 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 HOXC6P09630 235 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 TGFB3P10600 412 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 CA4P22748 312 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 EDNRBP24530 442 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 RFC1P35251 1148 aaPredicted RBP19.12■□□□□ 0.65
TDP2-202ENST00000378198 ARL4CP56559 192 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 TFAMQ00059 246 aaKnown RBP19.12■□□□□ 0.65
TDP2-202ENST00000378198 OTUD4Q01804 1114 aaKnown RBP19.12■□□□□ 0.65
TDP2-202ENST00000378198 SLC25A11Q02978 314 aaKnown RBP19.12■□□□□ 0.65
TDP2-202ENST00000378198 LAMTOR4Q0VGL1 99 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 ANGEL2Q5VTE6 544 aaKnown RBP19.12■□□□□ 0.65
TDP2-202ENST00000378198 DENND1BQ6P3S1 775 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 BBS12Q6ZW61 710 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 SNCAIPQ9Y6H5 919 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 USH1CQ9Y6N9 552 aa19.12■□□□□ 0.65
TDP2-202ENST00000378198 A0A0G2JMZ2 1700 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 LRRC37A2A6NM11 1700 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 SMAPO00193 183 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 ATP5HO75947 161 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 SRGAP2CP0DJJ0 459 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 YARSP54577 528 aaKnown RBP19.11■□□□□ 0.65
TDP2-202ENST00000378198 DNAJC3Q13217 504 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 SETDB1Q15047 1291 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 PTPN20Q4JDL3 420 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 ZC3H12AQ5D1E8 599 aaKnown RBP19.11■□□□□ 0.65
TDP2-202ENST00000378198 SCARA5Q6ZMJ2 495 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 CAPN12Q6ZSI9 719 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 ACTL9Q8TC94 416 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 LRRC8CQ8TDW0 803 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 TBC1D31Q96DN5 1066 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 ANKRD36BP1Q96IX9 119 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 XYLT2Q9H1B5 865 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 ZWILCHQ9H900 591 aa19.11■□□□□ 0.65
TDP2-202ENST00000378198 KIF9Q9HAQ2 790 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms