RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 MRPL43Q8N983 215 aaKnown RBP20.78■□□□□ 0.92
AUP1-201ENST00000377526 TNIP3Q96KP6 325 aa20.78■□□□□ 0.92
AUP1-201ENST00000377526 ZSWIM1Q9BR11 485 aa20.78■□□□□ 0.92
AUP1-201ENST00000377526 LMAN2LQ9H0V9 348 aa20.78■□□□□ 0.92
AUP1-201ENST00000377526 NGRNQ9NPE2 291 aaKnown RBP20.78■□□□□ 0.92
AUP1-201ENST00000377526 FNIP2Q9P278 1114 aa20.78■□□□□ 0.92
AUP1-201ENST00000377526 GTF3C4Q9UKN8 822 aa20.78■□□□□ 0.92
AUP1-201ENST00000377526 SSX2IPQ9Y2D8 614 aa20.78■□□□□ 0.92
AUP1-201ENST00000377526 TEX28O15482 410 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 PAEPP09466 180 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 OR1D2P34982 312 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 ARPP19P56211 112 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 TSPY1Q01534 308 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 ARID5AQ03989 594 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 SLC39A12Q504Y0 691 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 MDH1BQ5I0G3 518 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 SMYD5Q6GMV2 418 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 FAM171BQ6P995 826 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 ZNF397Q8NF99 534 aaPredicted RBP20.77■□□□□ 0.92
AUP1-201ENST00000377526 MICAL1Q8TDZ2 1067 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 TFAP2BQ92481 460 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 OXCT2Q9BYC2 517 aaPredicted RBP20.77■□□□□ 0.92
AUP1-201ENST00000377526 PRDM12Q9H4Q4 367 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.77■□□□□ 0.92
AUP1-201ENST00000377526 FAM49BQ9NUQ9 324 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 REV3LO60673 3130 aa20.77■□□□□ 0.92
AUP1-201ENST00000377526 PTPRDP23468 1912 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 PLXNA3P51805 1871 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 WDR27A2RRH5 827 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 AKR1B15C9JRZ8 316 aaPredicted RBP20.77■□□□□ 0.91
AUP1-201ENST00000377526 TPM1P09493 284 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 ROR1Q01973 937 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 ARID5BQ14865 1188 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 GRIN2CQ14957 1233 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 SFMBT2Q5VUG0 894 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 IRF2BP2Q7Z5L9 587 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 TC2NQ8N9U0 490 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 HEXIM2Q96MH2 286 aaKnown RBP20.77■□□□□ 0.91
AUP1-201ENST00000377526 DNAJC7Q99615 494 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 AIPL1Q9NZN9 384 aa20.77■□□□□ 0.91
AUP1-201ENST00000377526 CCDC130P13994 396 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 CPB1P15086 417 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 CD19P15391 556 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 BRD2P25440 801 aaKnown RBP20.76■□□□□ 0.91
AUP1-201ENST00000377526 GNA15P30679 374 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 CREMQ03060 361 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 MYCBPAPQ8TBZ2 947 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 MYLPFQ96A32 169 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 KLHL5Q96PQ7 755 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 ABHD10Q9NUJ1 306 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 IMPACTQ9P2X3 320 aa20.76■□□□□ 0.91
AUP1-201ENST00000377526 VNN2O95498 520 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 CYP11B1P15538 503 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 FERP16591 822 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 NDUFV1P49821 464 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 BMS1Q14692 1282 aaKnown RBP20.75■□□□□ 0.91
AUP1-201ENST00000377526 ASIC2Q16515 512 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 PPP1R26Q5T8A7 1209 aaPredicted RBP20.75■□□□□ 0.91
AUP1-201ENST00000377526 PDE12Q6L8Q7 609 aaKnown RBP20.75■□□□□ 0.91
AUP1-201ENST00000377526 RNF19BQ6ZMZ0 732 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 ADGRD2Q7Z7M1 963 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 NOP9Q86U38 636 aaKnown RBP20.75■□□□□ 0.91
AUP1-201ENST00000377526 CNGA4Q8IV77 575 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 DCP1BQ8IZD4 617 aaKnown RBP20.75■□□□□ 0.91
AUP1-201ENST00000377526 EPS8L1Q8TE68 723 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 PCED1BQ96HM7 432 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 PGLYRP2Q96PD5 576 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 B3GNT5Q9BYG0 378 aa20.75■□□□□ 0.91
AUP1-201ENST00000377526 NUCKS1Q9H1E3 243 aaKnown RBP20.75■□□□□ 0.91
AUP1-201ENST00000377526 CLDN5O00501 218 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 VDRP11473 427 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 SSTR3P32745 418 aaPredicted RBP20.74■□□□□ 0.91
AUP1-201ENST00000377526 PTK2Q05397 1052 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 GPR17Q13304 367 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 RAB33AQ14088 237 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 SGO2Q562F6 1265 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 ZNF697Q5TEC3 545 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 PAQR9Q6ZVX9 377 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 OR8K1Q8NGG5 319 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 SLC20A1Q8WUM9 679 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 SYN2Q92777 582 aaPredicted RBP20.74■□□□□ 0.91
AUP1-201ENST00000377526 MRPL38Q96DV4 380 aaKnown RBP20.74■□□□□ 0.91
AUP1-201ENST00000377526 RHOBTB2Q9BYZ6 727 aa20.74■□□□□ 0.91
AUP1-201ENST00000377526 NOCTQ9UK39 431 aaKnown RBP20.74■□□□□ 0.91
AUP1-201ENST00000377526 THAP12O43422 761 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 CFHP08603 1231 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 HNRNPH3P31942 346 aaKnown RBP20.73■□□□□ 0.91
AUP1-201ENST00000377526 HABP4Q5JVS0 413 aaKnown RBP20.73■□□□□ 0.91
AUP1-201ENST00000377526 HGSNATQ68CP4 663 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 ARHGAP17Q68EM7 881 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 WDR59Q6PJI9 974 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 PALB2Q86YC2 1186 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 FUKQ8N0W3 1084 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 SLC2A14Q8TDB8 520 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 ZNF606Q8WXB4 792 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 DDX1Q92499 740 aaKnown RBP20.73■□□□□ 0.91
AUP1-201ENST00000377526 ANP32BQ92688 251 aaKnown RBP20.73■□□□□ 0.91
AUP1-201ENST00000377526 CYFIP2Q96F07 1278 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 PDLIM2Q96JY6 352 aa20.73■□□□□ 0.91
AUP1-201ENST00000377526 FAM161BQ96MY7 647 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms