RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 HADHAP40939 763 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 TBCCQ15814 346 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 CRY2Q49AN0 593 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 TLK2Q86UE8 772 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 C9orf72Q96LT7 481 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 SUDS3Q9H7L9 328 aaPredicted RBP18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 ARHGEF38Q9NXL2 777 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 DCTN4Q9UJW0 460 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 C2CD2LO14523 706 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 NDUFS3O75489 264 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 ANP32DO95626 131 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 PLEKP08567 350 aaPredicted RBP18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 FNTAP49354 379 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 CNTN2Q02246 1040 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 THEMIS2Q5TEJ8 643 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 ICE2Q659A1 982 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 PSMC3IPQ9P2W1 217 aaPredicted RBP18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 RAD51CO43502 376 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 MYL6P60660 151 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 ZNF200P98182 395 aaPredicted RBP18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 ARHGEF7Q14155 803 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 GRIK5Q16478 980 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 POP1Q99575 1024 aaKnown RBP18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 CISHQ9NSE2 258 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 KANSL3Q9P2N6 904 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 POLBP06746 335 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 FBXO47Q5MNV8 452 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 ZNF410Q86VK4 478 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 MMGT1Q8N4V1 131 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 WTIPA6NIX2 430 aaPredicted RBP18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 GFAPP14136 432 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 AXLP30530 894 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 ACVR2BQ13705 512 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 MFSD10Q14728 455 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 NFE2Q16621 373 aaPredicted RBP18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 TMEM176AQ96HP8 235 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 F8VZ95 297 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 TLR2O60603 784 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 HIST1H2AGP0C0S8 130 aaPredicted RBP18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 HIST1H2ADP20671 130 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 COILP38432 576 aaPredicted RBP18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 PDAP1Q13442 181 aaKnown RBP18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 LRRC14Q15048 493 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 SYCP2LQ5T4T6 812 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 HIST1H2AHQ96KK5 128 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 HIST1H2AJQ99878 128 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 H2AFJQ9BTM1 129 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 ASB7Q9H672 318 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 FRMD3A2A2Y4 597 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 CXCL8P10145 99 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 PDK2Q15119 407 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 TRADDQ15628 312 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 CTXN3Q4LDR2 81 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 L3MBTL3Q96JM7 780 aaPredicted RBP18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 CCDC22O60826 627 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 SPRP35270 261 aaPredicted RBP18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 LBRQ14739 615 aaKnown RBP18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 HSP90AA5PQ58FG0 334 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 KIAA0895Q8NCT3 520 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 SHCBP1Q8NEM2 672 aa18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 TFB1MQ8WVM0 346 aaKnown RBP18.67■□□□□ 0.58
CLSTN1-202ENST00000377298 ACKR2O00590 384 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 PTPN11Q06124 597 aaPredicted RBP18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 ZNF280DQ6N043 979 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 PPIL6Q8IXY8 311 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 FBXO32Q969P5 355 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 CENPKQ9BS16 269 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 WDR18Q9BV38 432 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 ADCY3O60266 1144 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 ANXA9O76027 345 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 ASMTLO95671 621 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 KCNA4P22459 653 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 TWF1Q12792 350 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 TMEM132BQ14DG7 1078 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 SLC27A1Q6PCB7 646 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 NCLNQ969V3 563 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 CHORDC1Q9UHD1 332 aaPredicted RBP18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 URODP06132 367 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 PTF1AQ7RTS3 328 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 LINC00523Q86TU6 105 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 DNAJB3Q8WWF6 145 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 GOLPH3Q9H4A6 298 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 XPNPEP3Q9NQH7 507 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 UBR1Q8IWV7 1749 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 MAGEA4P43358 317 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 SOX10P56693 466 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 USP10Q14694 798 aaKnown RBP18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 PCSK7Q16549 785 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 RPAINQ86UA6 219 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 NLRP14Q86W24 1093 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 IPMKQ8NFU5 416 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 ISCUQ9H1K1 167 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 XAB2Q9HCS7 855 aaKnown RBP18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 CHMP2BQ9UQN3 213 aa18.66■□□□□ 0.58
CLSTN1-202ENST00000377298 LMNAP02545 664 aaKnown RBP18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 PTGER2P43116 358 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 ST3GAL1Q11201 340 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 EFTUD2Q15029 972 aaKnown RBP eCLIP18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 MRPS31Q92665 395 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms