RNA–Protein interactions for RNA: ENST00000376303.6

SYP-202, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 858 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-202ENST00000376303 ABCB6Q9NP58 842 aa18.93■□□□□ 0.62
SYP-202ENST00000376303 TMLHEQ9NVH6 421 aa18.93■□□□□ 0.62
SYP-202ENST00000376303 DDX43Q9NXZ2 648 aaKnown RBP18.93■□□□□ 0.62
SYP-202ENST00000376303 R3HCC1Q9Y3T6 440 aaKnown RBP18.93■□□□□ 0.62
SYP-202ENST00000376303 MYBPHLA2RUH7 354 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 SLC38A8A6NNN8 435 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 SOBPA7XYQ1 873 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 EIF3DO15371 548 aaKnown RBP eCLIP18.92■□□□□ 0.62
SYP-202ENST00000376303 LILRB5O75023 590 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 PRPF40AO75400 957 aaKnown RBP18.92■□□□□ 0.62
SYP-202ENST00000376303 PRAMEF12O95522 483 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 CSH1P0DML2 217 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 CSH2P0DML3 217 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 HMGA1P17096 107 aaKnown RBP18.92■□□□□ 0.62
SYP-202ENST00000376303 DDX6P26196 483 aaKnown RBP eCLIP18.92■□□□□ 0.62
SYP-202ENST00000376303 LHX1P48742 406 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 CCR3P51677 355 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 NRLP54845 237 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 MYO1EQ12965 1108 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 LRRC32Q14392 662 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 INTS6LQ5JSJ4 861 aaKnown RBP18.92■□□□□ 0.62
SYP-202ENST00000376303 CNNM4Q6P4Q7 775 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 RALGPS2Q86X27 583 aaPredicted RBP18.92■□□□□ 0.62
SYP-202ENST00000376303 CMTM8Q8IZV2 173 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 CELF5Q8N6W0 485 aaKnown RBP18.92■□□□□ 0.62
SYP-202ENST00000376303 GLIS3Q8NEA6 775 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 DHX58Q96C10 678 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 PI4K2AQ9BTU6 479 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 SLC46A2Q9BY10 475 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 KIAA1586Q9HCI6 787 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 INTS13Q9NVM9 706 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 THG1LQ9NWX6 298 aaKnown RBP18.92■□□□□ 0.62
SYP-202ENST00000376303 SIX4Q9UIU6 781 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 SNX9Q9Y5X1 595 aa18.92■□□□□ 0.62
SYP-202ENST00000376303 SPECC1L-ADORA2AF8WAN1 911 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 TNNC2P02585 160 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 F11P03951 625 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 PCSK1P29120 753 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 NLRP12P59046 1061 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 RPL10AP62906 217 aaKnown RBP18.91■□□□□ 0.62
SYP-202ENST00000376303 ASIC1P78348 528 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 SHC4Q6S5L8 630 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 DPH6Q7L8W6 267 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 TMEM150AQ86TG1 271 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 KIAA2013Q8IYS2 634 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 ZNF507Q8TCN5 953 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 HPS3Q969F9 1004 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 ZFYVE19Q96K21 471 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 EPC1Q9H2F5 836 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 MAGEF1Q9HAY2 307 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 GTSE1Q9NYZ3 720 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 HSPBP1Q9NZL4 362 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 GREB1Q4ZG55 1949 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 ANAPC1Q9H1A4 1944 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 CEP250Q9BV73 2442 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 DNAH14Q0VDD8 3507 aa18.91■□□□□ 0.62
SYP-202ENST00000376303 GABRDO14764 452 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 ACAT1P24752 427 aaKnown RBP18.9■□□□□ 0.62
SYP-202ENST00000376303 CTHP32929 405 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 HOXD13P35453 343 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 AVPR1AP37288 418 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 SOX9P48436 509 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 DUOXA2Q1HG44 320 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 SOWAHAQ2M3V2 549 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 FAM26FQ5R3K3 315 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 LMBRD2Q68DH5 695 aaPredicted RBP18.9■□□□□ 0.62
SYP-202ENST00000376303 SCARA3Q6AZY7 606 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 EPM2AIP1Q7L775 607 aaPredicted RBP18.9■□□□□ 0.62
SYP-202ENST00000376303 ERMP1Q7Z2K6 904 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 CBWD2Q8IUF1 395 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 ADGRF2Q8IZF7 708 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 FAM84AQ96KN4 292 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 PKMYT1Q99640 499 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 C7orf25Q9BPX7 421 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 UXTQ9UBK9 157 aaPredicted RBP18.9■□□□□ 0.62
SYP-202ENST00000376303 GTF3C4Q9UKN8 822 aa18.9■□□□□ 0.62
SYP-202ENST00000376303 MAGED2Q9UNF1 606 aaPredicted RBP18.9■□□□□ 0.62
SYP-202ENST00000376303 TDGF1P13385 188 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 CYP2F1P24903 491 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 CXCL12P48061 93 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 GPR15P49685 360 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 SNRPFP62306 86 aaKnown RBP18.89■□□□□ 0.61
SYP-202ENST00000376303 DDR2Q16832 855 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 CFAP221Q4G0U5 840 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 DGKKQ5KSL6 1271 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 OSTM1Q86WC4 334 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 WDR49Q8IV35 697 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 HSCBQ8IWL3 235 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 SPEM1Q8N4L4 309 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 DCLK2Q8N568 766 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 MAB21L3Q8N8X9 362 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 OR5B17Q8NGF7 314 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 MRPS31Q92665 395 aaKnown RBP18.89■□□□□ 0.61
SYP-202ENST00000376303 SECISBP2LQ93073 1101 aaKnown RBP18.89■□□□□ 0.61
SYP-202ENST00000376303 TRMT2BQ96GJ1 504 aaKnown RBP18.89■□□□□ 0.61
SYP-202ENST00000376303 FUBP3Q96I24 572 aaKnown RBP eCLIP18.89■□□□□ 0.61
SYP-202ENST00000376303 HPDLQ96IR7 371 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 SMG9Q9H0W8 520 aaKnown RBP18.89■□□□□ 0.61
SYP-202ENST00000376303 KIF9Q9HAQ2 790 aa18.89■□□□□ 0.61
SYP-202ENST00000376303 NCDNQ9UBB6 729 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms