RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 GFAPP14136 432 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 EEF1B2P24534 225 aaKnown RBP14.23□□□□□ -0.13
C9orf47-203ENST00000375851 THPOP40225 353 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 OAZ1P54368 228 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 CNTN2Q02246 1040 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 ACTN3Q08043 901 aaPredicted RBP14.23□□□□□ -0.13
C9orf47-203ENST00000375851 FAXCQ5TGI0 409 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 ARL8AQ96BM9 186 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 RMDN2Q96LZ7 410 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 P2RX7Q99572 595 aaKnown RBP14.23□□□□□ -0.13
C9orf47-203ENST00000375851 VPS33BQ9H267 617 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 GBA2Q9HCG7 927 aaPredicted RBP14.23□□□□□ -0.13
C9orf47-203ENST00000375851 LRRC4BQ9NT99 713 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 MARCOQ9UEW3 520 aaPredicted RBP14.23□□□□□ -0.13
C9orf47-203ENST00000375851 MTSS1O43312 755 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 CYP3A4P08684 503 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 SPRP35270 261 aaPredicted RBP14.23□□□□□ -0.13
C9orf47-203ENST00000375851 CTCFP49711 727 aaPredicted RBP14.23□□□□□ -0.13
C9orf47-203ENST00000375851 EFTUD2Q15029 972 aaKnown RBP eCLIP14.23□□□□□ -0.13
C9orf47-203ENST00000375851 MYCBPQ99417 103 aaPredicted RBP14.23□□□□□ -0.13
C9orf47-203ENST00000375851 FAM129AQ9BZQ8 928 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 NPHS2Q9NP85 383 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 THEGQ9P2T0 379 aa14.23□□□□□ -0.13
C9orf47-203ENST00000375851 SLURP2P0DP57 97 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 CXCL8P10145 99 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 CNPY4Q8N129 248 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 CPB2Q96IY4 423 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 FRMD8Q9BZ67 464 aaPredicted RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 TRIM15Q9C019 465 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 CATSPERBQ9H7T0 1116 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 TRPC7Q9HCX4 862 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 FAM8A1Q9UBU6 413 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 AP1G2O75843 785 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 SLC12A3P55017 1021 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 EVX2Q03828 476 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 PTPN11Q06124 597 aaPredicted RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 PCSK7Q16549 785 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 TFDP3Q5H9I0 405 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 IL31Q6EBC2 164 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 C4orf22Q6V702 233 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 RIBC1Q8N443 379 aaPredicted RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 IPMKQ8NFU5 416 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 SH3TC2Q8TF17 1288 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 NCLNQ969V3 563 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 CCDC124Q96CT7 223 aaKnown RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 TRIM54Q9BYV2 358 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 RANBP17Q9H2T7 1088 aaKnown RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 A1CFQ9NQ94 594 aaKnown RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 KRT82Q9NSB4 513 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 USP20Q9Y2K6 914 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 PPME1Q9Y570 386 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 CAMTA1Q9Y6Y1 1673 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 DDIASQ8IXT1 998 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 HAS1Q92839 578 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 SYNPO2Q9UMS6 1093 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 BMP6P22004 513 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 PTGER2P43116 358 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 KDSRQ06136 332 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 SREBF2Q12772 1141 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 RNF180Q86T96 592 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 EMC1Q8N766 993 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 SNX19Q92543 992 aa14.22□□□□□ -0.13
C9orf47-203ENST00000375851 ZNF669Q96BR6 464 aaPredicted RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 C20orf96Q9NUD7 363 aaPredicted RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 ABI2Q9NYB9 513 aaPredicted RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 AFF4Q9UHB7 1163 aaKnown RBP14.22□□□□□ -0.13
C9orf47-203ENST00000375851 PLA2G4AP47712 749 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 MAPRE1Q15691 268 aaKnown RBP14.21□□□□□ -0.13
C9orf47-203ENST00000375851 COBLL1Q53SF7 1204 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 ABRAQ8N0Z2 381 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 MDM1Q8TC05 714 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 KCNV2Q8TDN2 545 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 SEC16BQ96JE7 1060 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 SLITRK1Q96PX8 696 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 MRPL40Q9NQ50 206 aaKnown RBP14.21□□□□□ -0.13
C9orf47-203ENST00000375851 ARHGEF38Q9NXL2 777 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 MEIS2O14770 477 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 CYBBP04839 570 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 KCNA1Q09470 495 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 TTC23LQ6PF05 361 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 CHSY1Q86X52 802 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 OSMRQ99650 979 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 MMTAG2Q9BU76 263 aaKnown RBP14.21□□□□□ -0.13
C9orf47-203ENST00000375851 CPA4Q9UI42 421 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 LSM7Q9UK45 103 aaKnown RBP14.21□□□□□ -0.13
C9orf47-203ENST00000375851 PRRG1O14668 218 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 KRT4P19013 534 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 YY1P25490 414 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 HADHAP40939 763 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 RAP1GAPP47736 663 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 FCGRTP55899 365 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 PHEXP78562 749 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 OTUD4Q01804 1114 aaKnown RBP14.21□□□□□ -0.13
C9orf47-203ENST00000375851 GLIS3Q8NEA6 775 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 N4BP2L2Q92802 583 aaPredicted RBP14.21□□□□□ -0.13
C9orf47-203ENST00000375851 SERPINB12Q96P63 405 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 CYP3A43Q9HB55 503 aa14.21□□□□□ -0.13
C9orf47-203ENST00000375851 XAB2Q9HCS7 855 aaKnown RBP14.21□□□□□ -0.13
C9orf47-203ENST00000375851 KCNMB3Q9NPA1 279 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms