RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PTPRAP18433 802 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 KRT15P19012 456 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 MYL6P60660 151 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 SLC25A11Q02978 314 aaKnown RBP13.42□□□□□ -0.26
CTPS1-202ENST00000372621 ZFYVE27Q5T4F4 411 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 DCUN1D2Q6PH85 259 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 ZPBP2Q6X784 338 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 ARFGAP1Q8N6T3 406 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 TFAP2BQ92481 460 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 PCYT2Q99447 389 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 WDR83Q9BRX9 315 aaKnown RBP13.42□□□□□ -0.26
CTPS1-202ENST00000372621 TEX13BQ9BXU2 312 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 IMPG2Q9BZV3 1241 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 ETNK1Q9HBU6 452 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 NOP53Q9NZM5 478 aaKnown RBP13.42□□□□□ -0.26
CTPS1-202ENST00000372621 STK38LQ9Y2H1 464 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 SNCAIPQ9Y6H5 919 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 ANK1P16157 1881 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 HGSO14964 777 aaPredicted RBP13.42□□□□□ -0.26
CTPS1-202ENST00000372621 BANF1O75531 89 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 WFS1O76024 890 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 TAZQ16635 292 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 PARP6Q2NL67 630 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 MZB1Q8WU39 189 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 C10orf82Q8WW14 230 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 ERP27Q96DN0 273 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 MTMR12Q9C0I1 747 aa13.42□□□□□ -0.26
CTPS1-202ENST00000372621 SGK1O00141 431 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 MSCO60682 206 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 ATP5HO75947 161 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 RFC5P40937 340 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 HMGCS2P54868 508 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 GDF10P55107 478 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 GAD2Q05329 585 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 FSTL1Q12841 308 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 CAPN12Q6ZSI9 719 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 PCGF5Q86SE9 256 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 ZNF276Q8N554 614 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 NAT8LQ8N9F0 302 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 CPT1BQ92523 772 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 PDGFDQ9GZP0 370 aaPredicted RBP13.41□□□□□ -0.26
CTPS1-202ENST00000372621 NIF3L1Q9GZT8 377 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 E7ESA3 106 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 RPSAP08865 295 aaKnown RBP13.41□□□□□ -0.26
CTPS1-202ENST00000372621 T-ENOLP0DO92 83 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 CA4P22748 312 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 GEMIN4P57678 1058 aaKnown RBP13.41□□□□□ -0.26
CTPS1-202ENST00000372621 HIF1AQ16665 826 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 MSS51Q4VC12 460 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 CYP4A22Q5TCH4 519 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 ANKRD22Q5VYY1 191 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 ERICH1Q86X53 443 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 MAB21L3Q8N8X9 362 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 AS3MTQ9HBK9 375 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 ABLIM1O14639 778 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 ASPAP45381 313 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 CCNG1P51959 295 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 ZNF394Q53GI3 561 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 SPDYAQ5MJ70 313 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 FNBP1LQ5T0N5 605 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 ADGRD1Q6QNK2 874 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 CATSPERGQ6ZRH7 1159 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 PPIL6Q8IXY8 311 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 THOC1Q96FV9 657 aaKnown RBP13.41□□□□□ -0.26
CTPS1-202ENST00000372621 LRRC37BQ96QE4 947 aa13.41□□□□□ -0.26
CTPS1-202ENST00000372621 RAB3IPQ96QF0 476 aaPredicted RBP13.41□□□□□ -0.26
CTPS1-202ENST00000372621 SAE1Q9UBE0 346 aaPredicted RBP13.41□□□□□ -0.26
CTPS1-202ENST00000372621 IFNB1P01574 187 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 HARSP12081 509 aaKnown RBP13.4□□□□□ -0.26
CTPS1-202ENST00000372621 IL1R2P27930 398 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 RFC1P35251 1148 aaPredicted RBP13.4□□□□□ -0.26
CTPS1-202ENST00000372621 PSMC4P43686 418 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 CTCFP49711 727 aaPredicted RBP13.4□□□□□ -0.26
CTPS1-202ENST00000372621 SETDB1Q15047 1291 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 STXBP2Q15833 593 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 SGSM1Q2NKQ1 1148 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 SMYD5Q6GMV2 418 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 ANKMY2Q8IV38 441 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 KIAA0319LQ8IZA0 1049 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 LRRC8CQ8TDW0 803 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 INPP5DQ92835 1189 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 TMEM237Q96Q45 408 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 FRMD8P1Q9BZ68 369 aaPredicted RBP13.4□□□□□ -0.26
CTPS1-202ENST00000372621 HACL1Q9UJ83 578 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 GOLGA8SH3BPF8 625 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 GOLGA8MH3BSY2 632 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 LRCH4O75427 683 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 TOM1L1O75674 476 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 DCTN3O75935 186 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 KRT4P19013 534 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 SLC8A3P57103 927 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 LACTBP83111 547 aaPredicted RBP13.4□□□□□ -0.26
CTPS1-202ENST00000372621 OTUD4Q01804 1114 aaKnown RBP13.4□□□□□ -0.26
CTPS1-202ENST00000372621 PLCB3Q01970 1234 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 TFDP1Q14186 410 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 EFTUD2Q15029 972 aaKnown RBP eCLIP13.4□□□□□ -0.263e-6■□□□□ 10.7
CTPS1-202ENST00000372621 BBS12Q6ZW61 710 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 OTOAQ7RTW8 1153 aa13.4□□□□□ -0.26
CTPS1-202ENST00000372621 ACTL9Q8TC94 416 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms